Gene Information

Name : YBT020_16040 (YBT020_16040)
Accession : YP_005566856.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3138487 - 3139158 bp
Length : 672 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGACTTCATTATTAAAATTAGACAAAGTAAGTAAAGTGTACGGAGAAGGGAATACGGAAGTAACAGCCCTTCATCCGAT
ATCACTTGATGTGAAAGCTGGAGAATTTATCGGAATCGTCGGTCCTTCTGGATCAGGAAAAAGTACGTTATTATCAATCG
CGGGTGCACTATTATCACCGTCAAAAGGGGATATTTATATTCGTGAGCAAAATATTACACAGTTATCAGAAAAGGAAATG
ACAGACATTCGTTTGAAAAAAATCGGCTTCATTTTCCAGTTTGCAAACCTTGTTCCATATTTAAATGTGAAGGAACAGTT
ACTTTACATTGCTAAGCTGAAAAAAGAAAGTAAACAAGAATCAGAAAAGCGTGCGGATCATTTATTAGCAGCATTTGGAT
TAGGAGAAAGAAAAAATCATTATCCAAATCAACTATCTGGTGGGGAAAAACAAAGGGTAGCAATTGCTCGTGCGTTCATG
AATAACCCAGATTTAATATTAGCGGATGAGCCAACGGCAAGCTTAGACTCAAAACGCGCACGTGAAGTTGTTGAAATGAT
GAAACGTGAAGTGAAGGAGAGCCAAAAAGCAGCAATTATGATTACACATGATGAAAGAATGCTTGATGTATGTGATCGTA
TATTGACGCTTCGAGATGGACAATTAATATAA

Protein sequence :
MTSLLKLDKVSKVYGEGNTEVTALHPISLDVKAGEFIGIVGPSGSGKSTLLSIAGALLSPSKGDIYIREQNITQLSEKEM
TDIRLKKIGFIFQFANLVPYLNVKEQLLYIAKLKKESKQESEKRADHLLAAFGLGERKNHYPNQLSGGEKQRVAIARAFM
NNPDLILADEPTASLDSKRAREVVEMMKREVKESQKAAIMITHDERMLDVCDRILTLRDGQLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 3e-41 47
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 2e-32 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YBT020_16040 YP_005566856.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-35 43