Gene Information

Name : YBT020_12620 (YBT020_12620)
Accession : YP_005566180.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2492269 - 2492928 bp
Length : 660 bp
Strand : +
Note : COG0110 Acetyltransferase (isoleucine patch superfamily)

DNA sequence : 
ATGAAGTATCCATTATATAATCATTGGTCAGAAACGAAGTATTTAAAAGATATAGTTACAAATCCACTCATTGAGGTAGG
AGAGTACTCCTACTATTCAGGGTATTATGGTCACCAAAATTTTGAAGATGGCTGTGTAAGGTATTTGTGGGGGGATGCTA
AGTCCCGAGCACTTTTCAATCCAATTGAACAGATGGGATGGCATCTTGATAAACTCATTATTGGGAATTATGTTTGTATT
GCCAGTGGAGTAGTCATTTTAATGGGTGGTAATCATAATCATCACTCAGAATGGATTACAGTATATCCATTCGCTGAGCA
AATTGCACATTCATATGAACCGAAGGGTGATACAGTCATTAAAAGTGATGCTTGGATTGGAATGAATGCTATAATAATGC
CTGGCATTACAATTGGTGAAGGTGCAATCGTTGCAGCAGGATCTGTCGTAAGTAAAGATGTTCCGCCGTATACAATAGTT
GGTGGAAATCCTGCTAAGGAAATAAAGAAGCGATTCACTGATACAGAAATGAATATGCTGATGGAAATGCGTTGGTTTGA
TTGGAATAGAGAATTAGTTGAGAAGGCAATGCCCATATTATCTAGCTCATCTATTGAACTATTATATGATTTTTATAAAA
AGGAAGTAAAAAATAGATAA

Protein sequence : 
MKYPLYNHWSETKYLKDIVTNPLIEVGEYSYYSGYYGHQNFEDGCVRYLWGDAKSRALFNPIEQMGWHLDKLIIGNYVCI
ASGVVILMGGNHNHHSEWITVYPFAEQIAHSYEPKGDTVIKSDAWIGMNAIIMPGITIGEGAIVAAGSVVSKDVPPYTIV
GGNPAKEIKKRFTDTEMNMLMEMRWFDWNRELVEKAMPILSSSSIELLYDFYKKEVKNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 6e-33 47
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-32 46
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-32 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YBT020_12620 YP_005566180.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 2e-60 59
YBT020_12620 YP_005566180.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 2e-33 47
YBT020_12620 YP_005566180.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 3e-36 46
YBT020_12620 YP_005566180.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 6e-33 46
YBT020_12620 YP_005566180.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 6e-33 46
YBT020_12620 YP_005566180.1 chloramphenicol acetyltransferase CP000675.2.gene50.p0 Protein 3e-41 45
YBT020_12620 YP_005566180.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 2e-33 43
YBT020_12620 YP_005566180.1 chloramphenicol acetyltransferase NC_011595.7057349.p0 Protein 3e-32 42
YBT020_12620 YP_005566180.1 chloramphenicol acetyltransferase NC_010410.6000796.p0 Protein 3e-32 42
YBT020_12620 YP_005566180.1 chloramphenicol acetyltransferase NC_011586.7045146.p0 Protein 1e-32 42