Gene Information

Name : YBT020_12120 (YBT020_12120)
Accession : YP_005566080.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2399562 - 2400329 bp
Length : 768 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGTCAACAAATGTAGTTACTGTAGAAAGTGTAGAAAAAACGTATGGGAAAAGAAATGAGAATCAGTCAAAAGCATTAAG
GGGTGTGTCATTAAGTATGAAAGAAGGGGAATTTGTAGGGATTATGGGTCCTTCTGGATCTGGAAAGACGACTTTACTGA
ATGTGATTAGTACATTGGATCAAGCGACAGGTGGTAGTGTGACAATAGCTGGTACAAATATTACTTCTATGAAGGGGAAT
GCATTATCAGATTTTCGATCTCAAAAATTAGGATTCATCTTTCAAGATTTTAACTTACTTGAAAACTTATCAATTTATGA
AAATATCGCTTTACCACTTTCTCTGCAAGGCGTACCTTCAAGTGAAATTACTGGAAAGGTAAATGAGGTGGCGAAGAAAT
TAGGAATTACTGAAATTTTAACGAAATATCCAACTGCTGTTTCTGGTGGACAAAAGCAAAGAACAGCGGCAGCACGAGCT
TTAGTACATAATCCAGCAATCGTATTAGCAGATGAACCGACAGGAGCACTTGATAGTAAAAATGCAAAAAGCTTACTAGA
AGCGATGCAAGATTTACATGAAAATCATAATGTAAGTATTTTGATGGTTACACACGATGCATTTAGTGCCAGTTATTGTG
AGCGTATATTATTTATTCAAGATGGTCTTCTATATAAAGAATTAAAGCGTCAAGGAACGCGAGAAAGTTTCTATCAAGAC
ATTTTAGGTGTGCTCGCTCATATGGGCTCAGCTGCTGAGTCTAAGTAG

Protein sequence : 
MSTNVVTVESVEKTYGKRNENQSKALRGVSLSMKEGEFVGIMGPSGSGKTTLLNVISTLDQATGGSVTIAGTNITSMKGN
ALSDFRSQKLGFIFQDFNLLENLSIYENIALPLSLQGVPSSEITGKVNEVAKKLGITEILTKYPTAVSGGQKQRTAAARA
LVHNPAIVLADEPTGALDSKNAKSLLEAMQDLHENHNVSILMVTHDAFSASYCERILFIQDGLLYKELKRQGTRESFYQD
ILGVLAHMGSAAESK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YBT020_12120 YP_005566080.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-38 42
YBT020_12120 YP_005566080.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-34 41
YBT020_12120 YP_005566080.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-39 41