Gene Information

Name : YBT020_10175 (YBT020_10175)
Accession : YP_005565699.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Resistance
Product : response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2011857 - 2012534 bp
Length : 678 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
TTGCTACCAAAAATTTTAATAGTAGATGACGATCCACATATTAGAGAACTTGTTTCTATATTTTTAGAGCGGGAAGGATT
TCAAACATATGAAGCAATTGATGGTCTAGATGCACTTCAAAAAATAGATGAAGTGAAAGTTGATATGGTTATTCTTGATA
TCATGATGCCGAATATGGATGGATTTGATGTATGTTTTGAATTAAGAAAATACTATGATATTCCGATTTTGATGCTAACT
GCTAAAGGAGAAACATCTCAAAAAGTAAAAGGGTTTCATCTTGGTACGGATGATTATCTTGTAAAACCATTTGATCCGAT
AGAACTAGTAGTGAGGGTAAAGGCGTTATTGAAACGTTATCAAATTACAGTGTCGCAATCAATTCAAGTTGGAAATGTAC
TGTTAAACCGTAAAACATTTGAAGTTACAACTGGAGAACAAACGGTTACGTTACCGCTAAAAGAATTCGAATTGCTCTTT
ACTTTAGGCTCTAAAGCGGGGAGAACTTGTTCGAGAGAGCAATTAATTGAAGATGTATGGGGATATGATTTTGAAGGGAA
TGAACGCACACTAGACGTTCATATAAATCGGTTACGTGAGAAGTTTCAAGAAGAGAAGTCGAAATTTAGTATTAAAACAA
TAAGGGGTTTAGGATATCGCTTAGAGGTAAGTAAATGA

Protein sequence :
MLPKILIVDDDPHIRELVSIFLEREGFQTYEAIDGLDALQKIDEVKVDMVILDIMMPNMDGFDVCFELRKYYDIPILMLT
AKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQITVSQSIQVGNVLLNRKTFEVTTGEQTVTLPLKEFELLF
TLGSKAGRTCSREQLIEDVWGYDFEGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLEVSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 9e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YBT020_10175 YP_005565699.1 response regulator NC_003923.1003749.p0 Protein 7e-45 44
YBT020_10175 YP_005565699.1 response regulator NC_002952.2859905.p0 Protein 7e-45 43
YBT020_10175 YP_005565699.1 response regulator NC_007622.3794472.p0 Protein 6e-45 43
YBT020_10175 YP_005565699.1 response regulator NC_009641.5332272.p0 Protein 9e-45 43
YBT020_10175 YP_005565699.1 response regulator NC_013450.8614421.p0 Protein 9e-45 43
YBT020_10175 YP_005565699.1 response regulator NC_007793.3914279.p0 Protein 9e-45 43
YBT020_10175 YP_005565699.1 response regulator NC_002745.1124361.p0 Protein 9e-45 43
YBT020_10175 YP_005565699.1 response regulator NC_009782.5559369.p0 Protein 9e-45 43
YBT020_10175 YP_005565699.1 response regulator NC_002951.3237708.p0 Protein 9e-45 43
YBT020_10175 YP_005565699.1 response regulator NC_002758.1121668.p0 Protein 9e-45 43
YBT020_10175 YP_005565699.1 response regulator AF310956.2.orf0.gene Protein 4e-35 42
YBT020_10175 YP_005565699.1 response regulator NC_012469.1.7686381. Protein 3e-33 42
YBT020_10175 YP_005565699.1 response regulator AM180355.1.gene1830. Protein 3e-39 41
YBT020_10175 YP_005565699.1 response regulator EU250284.1.orf4.gene Protein 2e-34 41
YBT020_10175 YP_005565699.1 response regulator HE999704.1.gene2815. Protein 1e-38 41
YBT020_10175 YP_005565699.1 response regulator NC_012469.1.7685629. Protein 4e-40 41