Gene Information

Name : YBT020_28751 (YBT020_28751)
Accession : YP_005563540.1
Strain :
Genome accession: NC_017199
Putative virulence/resistance : Virulence
Product : ABC transporter related protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 17430 - 18110 bp
Length : 681 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGATTACGTTAAATCATATTGCTAAAACGTATTATCAAGGGAAATTGGCAGTGCCAATTTTACATGGTATTAGTTTAAC
AATTCAGAGCGGTGAGTTCGTTTCTATTATGGGACCGTCTGGTTCTGGTAAATCAACGCTTATGAATATTATCGGTTGTT
TAGATCGTCCGACAGAAGGCGAATATATGCTGAGTGATGTAAATATCTTAACGGCAGACGAGTCAAAACTAGCTTTAATT
CGTAATGAATATATTGGCTTTGTGTTCCAGCATTTTAATTTACTGCCACGTCTTTCAGCAGTGGAAAACGTTGAACTTCC
GCTCATCTATGGTGGGGTGAAGAAAGCAGAGCGCCGTCAAAGAGCTCTGGAAGCGCTTGGGAAAGTTGGATTGTCAGATA
GAGTGCACCATTTACCTAGTGAGTTATCAGGTGGACAGAAGCAACGTGTAGCAATTGCGAGATCGATTGCAAATAATCCA
ACGTTCATTATGGCCGATGAGCCAACAGGTGCACTTGATACGAAGTCTGGTGAACAAGTTATGGATATTTTCACGAAGCT
CAATGCAGAAGGTACGACGATTGTTATGGTTACACATGAAGAGGAAGTAGCAGCTTATTCTTCTCGTCGCATTGTACTGC
GAGATGGGAAAATTACGGAAGATAGAAGGTGTGCAGTATGA

Protein sequence : 
MITLNHIAKTYYQGKLAVPILHGISLTIQSGEFVSIMGPSGSGKSTLMNIIGCLDRPTEGEYMLSDVNILTADESKLALI
RNEYIGFVFQHFNLLPRLSAVENVELPLIYGGVKKAERRQRALEALGKVGLSDRVHHLPSELSGGQKQRVAIARSIANNP
TFIMADEPTGALDTKSGEQVMDIFTKLNAEGTTIVMVTHEEEVAAYSSRRIVLRDGKITEDRRCAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YBT020_28751 YP_005563540.1 ABC transporter related protein NC_012469.1.7686878. Protein 2e-62 60
YBT020_28751 YP_005563540.1 ABC transporter related protein NC_008702.1.4606598. Protein 5e-45 49
YBT020_28751 YP_005563540.1 ABC transporter related protein CP001581.1.gene798.p Protein 1e-37 43
YBT020_28751 YP_005563540.1 ABC transporter related protein CP001581.1.gene598.p Protein 2e-36 43
YBT020_28751 YP_005563540.1 ABC transporter related protein NC_012469.1.7686946. Protein 2e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YBT020_28751 YP_005563540.1 ABC transporter related protein VFG0869 Protein 4e-25 41