Gene Information

Name : ydfA (BSNT_00917)
Accession : YP_005559736.1
Strain : Bacillus subtilis BEST195
Genome accession: NC_017196
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 573888 - 575195 bp
Length : 1308 bp
Strand : +
Note : from glimmer orf00793

DNA sequence :
TTGACATCAATGATTTTGGCAGTATTCATCTTTTTATTAACTCTAGTATTGGTCATATGGCAGCCGAAAAATTTATCTAT
AGGGTGGTCAGCCTGTGGAGGCGCAGTTTTAGCTCTAATAGCAGGTGTTGTCAATTTTCATGATGTGTTAACTGTGACAG
GGATTGTTTGGAATGCGACCTTGGCTTTTGTGGCCATCATACTGATATCGTTAATTCTTGATAATATCGGTTTCTTTGAA
TGGGCAGCGCTTCATATGGCTAAGGCTGCAAAAGGAAACGGTGTGCGGATGTTCGTTTATGTATCTCTATTAGGAGCTAT
TGTCGCCGCGTTATTTGCAAATGACGGTGCAGCTCTTATATTGACACCAATCGTATTAGCGATGGTCAGAGCATTACATT
TTAATGAAAAATTAGTTTTTCCTTTTATCATTGCCAGCGGATTTATTGCGGATACCACTTCGCTTCCTTTAGTAGTGAGC
AATTTGGTCAACATTGTTTCAGCGGACTATTTTCATATTACGTTTATTGATTATGCATCCAGAATGGTTGTCCCGTACTT
GTTTTCGCTGCTGGCGAGCATCATTGTACTTTACCTTTTCTTTAGAAAAAGCATACCAAAACGCTATGATCTGACTGAGG
TTAAAAAACCTGTTGAAGCAATTAAAGATCAAAACATGTTCAGACTGTCATGGTATATCTTAGGGCTGCTGTTAATTGGA
TATTTTGCAAGTGAATTTTTTTCTATCCCTGTATCAGTGGTAGCGGGCAGCATTGCGATCATTTTCTTAATCGCTGCGCA
AAAGAGTCCGGCCGTCCATACAAAGAAAGTGGTGAAAGAGGCGCCATGGGCTATCGTATTCTTTTCAATTGGCATGTACG
TTGTTGTGTATGGTGTCCGAAATGCCGGATTAACGGATGTCCTTTCAGATGTGATTCAAGCCGCAGCTGATCAAGGATTG
TTTGCTGGGACAATTGGAATGGGCTTTATTGCGGCGATTCTTTCTTCCATTATGAATAACTTGCCGACTGTTATGATTGA
CGCATTGGCTATTGCCGGTACAGACACACATGGGATGATGAGAGAAGCGCTTATTTATGCAAATGTGATCGGTTCAGATT
TAGGGCCTAAAATAACACCGATTGGTTCCTTGGCGACATTATTATGGCTTCATGTTCTTTCGCACAAAGGTATGAAGATT
TCCTGGGGCACGTATTTTAAAACAGGAATTATCCTCACGATACCCACTTTATTGATCACACTTGTCGGCCTGTATATTTG
GCTGCTGATAATCCATTCTTGTTTCTAA

Protein sequence :
MTSMILAVFIFLLTLVLVIWQPKNLSIGWSACGGAVLALIAGVVNFHDVLTVTGIVWNATLAFVAIILISLILDNIGFFE
WAALHMAKAAKGNGVRMFVYVSLLGAIVAALFANDGAALILTPIVLAMVRALHFNEKLVFPFIIASGFIADTTSLPLVVS
NLVNIVSADYFHITFIDYASRMVVPYLFSLLASIIVLYLFFRKSIPKRYDLTEVKKPVEAIKDQNMFRLSWYILGLLLIG
YFASEFFSIPVSVVAGSIAIIFLIAAQKSPAVHTKKVVKEAPWAIVFFSIGMYVVVYGVRNAGLTDVLSDVIQAAADQGL
FAGTIGMGFIAAILSSIMNNLPTVMIDALAIAGTDTHGMMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSHKGMKI
SWGTYFKTGIILTIPTLLITLVGLYIWLLIIHSCF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 8e-128 69
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-124 68
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-130 68
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-108 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ydfA YP_005559736.1 hypothetical protein BAC0575 Protein 1e-130 69
ydfA YP_005559736.1 hypothetical protein BAC0574 Protein 9e-127 69
ydfA YP_005559736.1 hypothetical protein BAC0576 Protein 4e-107 60
ydfA YP_005559736.1 hypothetical protein BAC0031 Protein 5e-104 60
ydfA YP_005559736.1 hypothetical protein BAC0578 Protein 3e-106 60
ydfA YP_005559736.1 hypothetical protein BAC0577 Protein 7e-105 58