Gene Information

Name : ydeM (BSNT_00909)
Accession : YP_005559731.1
Strain : Bacillus subtilis BEST195
Genome accession: NC_017196
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 570376 - 570801 bp
Length : 426 bp
Strand : +
Note : from glimmer orf00785

DNA sequence :
GTGAAGTTAGATGAGTTTACAATTGGCCAGGTCTTCAAAACGAAATCATTAAAAGTATCCAAAGATGATATTATGCGGTT
TGCGGGTGAATTTGACCCCCAGTATATGCATGTAGATGAAGAAAAAGCGAGTAAAGGCAGATTTAATGGAATTATCGCTT
CCGGCATACAAACACTGGCCATATCTTTTAAACTTTGGATTGAAGAAGGTTTCTATGGAGACGATATTATAGCCGGAACA
GAGATGAATCATATGATATTCATAAAACCCGTATATCCGGATGATGAATTGTTTACAATTGTTAAGGTTCTTGATAAGCA
GCCAAAGAGAAATGAATTGGGAATACTCACAGTATTGCTATCTACTTATAATCAAAAAGAAGTAAAAGTGTTTGAAGGTG
AGTTATCTGTATTGATCAAACGATAA

Protein sequence :
MKLDEFTIGQVFKTKSLKVSKDDIMRFAGEFDPQYMHVDEEKASKGRFNGIIASGIQTLAISFKLWIEEGFYGDDIIAGT
EMNHMIFIKPVYPDDELFTIVKVLDKQPKRNELGILTVLLSTYNQKEVKVFEGELSVLIKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAA82222.2 - Not tested Type-II SCCmec Protein 5e-40 55
SAUSA300_0031 YP_492751.1 hypothetical protein Not tested Type-IV SCCmec Protein 8e-40 55
unnamed BAD24825.1 conserved hypothetical protein Not tested Type-V SCCmec Protein 5e-40 55
SERP2522 YP_190063.1 acyl dehydratase MaoC Not tested Type-II SCCmec Protein 8e-40 55
maoC YP_184943.1 MaoC domain-containing protein Not tested Type-I SCCmec Protein 8e-40 55
unnamed ACL99837.1 hypothetical protein Not tested Type-V SCCmec Protein 5e-40 55
SH0090 YP_252005.1 hypothetical protein Not tested SCCmec Protein 8e-40 55
SAR0038 YP_039514.1 hypothetical protein Not tested Type-II SCCmec Protein 8e-40 55
unnamed BAG06198.1 MaoC domain protein dehydratase Not tested Type-VII SCCmec Protein 5e-40 55
unnamed BAA94333.1 hypothetical protein Not tested Type-I SCCmec Protein 7e-40 55
SAMSHR1132_00310 YP_005324555.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 8e-40 55
unnamed BAB47625.1 hypothetical protein Not tested Type-III SCCmec Protein 5e-40 55
MW0030 NP_644845.1 hypothetical protein Not tested Type-IV SCCmec Protein 8e-40 55
unnamed BAC57477.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 5e-40 55
SAV0040 NP_370564.1 hypothetical protein Not tested Type-II SCCmec Protein 8e-40 55
unnamed BAB72114.1 hypothetical protein Not tested Type-IVa SCCmec Protein 5e-40 55
SA0037 NP_373277.1 hypothetical protein Not tested Type-II SCCmec Protein 8e-40 55
unnamed BAB72133.1 hypothetical protein Not tested Type-IVb SCCmec Protein 5e-40 55
SAPIG0041 YP_005732851.1 MaoC like domain, putative Not tested Type-V SCCmec Protein 8e-40 55