Gene Information

Name : gbsA (BSNT_04567)
Accession : YP_005562324.1
Strain : Bacillus subtilis BEST195
Genome accession: NC_017196
Putative virulence/resistance : Virulence
Product : glycine betaine aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2947831 - 2949303 bp
Length : 1473 bp
Strand : -
Note : from glimmer orf04299

DNA sequence :
ATGAGTCAAACATTATTCATTGACGGAGAATGGATCAGTGCCGAAAAAGAACAGATCCGCAGTATTATCAACCCATTTAA
TCAAGAAGAAATTGCAACTGTAAGCGAGGGAGGGCGAGAGGACGCCATCAAAGCAATCGCAGCCGCACGCAGAGCATTTG
ACAAAGGAGAATGGTCATCGCTATCCGGGCTTGAACGCGGAAAAATTGTTCTGAAAATTGCGGAATTAATCAGACGTGAT
CTTGAGGAGCTGGCTGAGCTTGAATCTCTTGATACAGGAAAAACACTCGAAGAAAGCAAGGCCGATATGGACGATATCGC
CAATGTTTTTCAATATTACGCCGGCTTGGCAGACAAAGATGGCGGAGAGATCGTTTCATCTCCGATTCCTGATTCAGAAA
GCAAAATTATTAGAGAGCCAATCGGGGTTTGCGGCCAGATCACTCCATGGAATTATCCGCTCCTTCAAGCGAGCTGGAAA
ATCGCCCCTGCACTGGCTGCAGGAAACACAATCGTCATGAAGCCGAGTGAGATTACGCCGCTGACGACAATCAAAGTCTT
TAAGCTGATGGAAGAAGCCGGTGTACCAAAAGGTGTCGCAAATCTTGTCCTTGGACCGGGAGCCACAGTGGGCGACGAGC
TTGCCGTAAACAAAGACGTCGATTTGATTTCGTTTACGGGCGGAATTGAAACAGGCAAAAAAATCATGCGGGCGGCAAGC
GGAAACGTCAAAAAAATCGCCCTTGAACTTGGCGGGAAAAACCCAAATATTGTTTTCAAGGACGCGGATTTAGAAGTTGC
GGTTGATCAGGCCTTAAACGCTGTATTTTTCCACGCCGGCCAAGTATGCTCTGCAGGTTCCCGCTTGCTTGTTGAGGATG
CCATTCATGATCAATTTTTGGCGGAGCTGGTCAAACGGGCAAAACGCATAAAACTCGGAAACGGTTTTCATGCTGAGACA
GAAAGCGGTCCGCTTATTTCGGCGGAGCACAGGGCAAAGGTAGAAAAATATGTAGAGATCGGAATAGAGGAAGGCGCGAA
GCTGGAGACAGGAGGCAAACGCCCGGAAGACCCTGCGCTTCAAAACGGCTTTTTCTATGAACCTACTATTTTCTCAAACT
GTAATTCTGACATGAGAATCGTTCAGGAAGAGGTTTTCGGTCCGGTATTGACAGTCGAAACCTTCAGCTCTGAAGAAGAG
GTAATCGAGCTTGCGAATGATACCATCTATGGCTTGGCTGGAGCGGTATGGTCAAAAGACATTGAAAAGTGCGAACGGGT
AGCAGCCCGCTTGAGAATGGGAACCGTTTGGATCAACGATTTTCATCCGTACTTTGCACAAGCGCCATGGGGCGGATATA
AGCAATCCGGGTTCGGACGCGAGCTTGGAAAAATAGGCCTTGAAGAATACACAGAAGTCAAACATGTATACCGCAATACA
AAACCGGCAGCGGTTAACTGGTTCAATTCATAA

Protein sequence :
MSQTLFIDGEWISAEKEQIRSIINPFNQEEIATVSEGGREDAIKAIAAARRAFDKGEWSSLSGLERGKIVLKIAELIRRD
LEELAELESLDTGKTLEESKADMDDIANVFQYYAGLADKDGGEIVSSPIPDSESKIIREPIGVCGQITPWNYPLLQASWK
IAPALAAGNTIVMKPSEITPLTTIKVFKLMEEAGVPKGVANLVLGPGATVGDELAVNKDVDLISFTGGIETGKKIMRAAS
GNVKKIALELGGKNPNIVFKDADLEVAVDQALNAVFFHAGQVCSAGSRLLVEDAIHDQFLAELVKRAKRIKLGNGFHAET
ESGPLISAEHRAKVEKYVEIGIEEGAKLETGGKRPEDPALQNGFFYEPTIFSNCNSDMRIVQEEVFGPVLTVETFSSEEE
VIELANDTIYGLAGAVWSKDIEKCERVAARLRMGTVWINDFHPYFAQAPWGGYKQSGFGRELGKIGLEEYTEVKHVYRNT
KPAAVNWFNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-71 42
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 9e-66 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gbsA YP_005562324.1 glycine betaine aldehyde dehydrogenase VFG0082 Protein 2e-71 42