Gene Information

Name : ribD (BSNT_03464)
Accession : YP_005561535.1
Strain : Bacillus subtilis BEST195
Genome accession: NC_017196
Putative virulence/resistance : Unknown
Product : riboflavin-specific deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2232171 - 2233256 bp
Length : 1086 bp
Strand : -
Note : from glimmer orf03251

DNA sequence :
ATGGAAGAGTATTATATGAAGCTGGCCTTAGATCTTGCGAAGCAGGGCGAAGGACAGACCGAATCCAATCCGCTCGTCGG
CGCTGTTGTCGTAAAGGACGGACAAATTGTCGGAATGGGCGCCCATTTAAAATATGGTGAAGCTCATGCAGAAGTTCATG
CCATCCATATGGCTGGAGCACATGCAGAGGGTGCCGACATTTACGTTACACTCGAACCGTGCAGCCATTACGGAAAAACA
CCGCCATGTGCAGAATTGATTATCAACTCTGGCATCAAAAGAGTGTTCGTGGCGATGAGAGATCCTAATCCGCTTGTGGC
TGGAAGAGGGATCAGCATGATCAAAGAAGCCGGCATTGAGGTAAGGGAAGGCATCCTGGCAGACCAGGCGGAGAGCCTGA
ATGAAAAATTTCTGCACTTTATGAGGACAGGCCTTCCGTACGTCACGCTAAAAGCGGCTGCCAGCCTTGACGGCAAGATA
GCTACCAGCACGGGTGACAGCAAATGGATCACGTCAGAGGCTGCAAGACAGGATGCTCAGCAATACAGGAAAACACACCA
AAGCATTTTAGTCGGAGTTGGCACAGTGAAAGCCGACAATCCGAGCTTAACCTGCAGACTGCCGAATGTAACAAAACAGC
CGGTTCGGGTCATACTTGATACCGTACTCTCGATTCCTGAGGACGCTAAAGTGATTTGCGATCAAATAGCGCCGACATGG
ATTTTTACGACGGCACGCGCAGACGAGGAAAAGAAAAAACGGCTTTCAGCTTTCGGAGTGAACATATTTACACTTGAAAC
CGAGCGCATTCAAATTCCCGATGTTTTGAAGATCCTAGCGGAAGAAGGTATCATGTCGGTGTATGTGGAAGGCGGTTCAG
CTGTTCACGGAAGCTTTGTCAAAGAAGGCTGTTTTCAAGAAATCATCTTCTATTTTGCCCCTAAACTAATCGGAGGAACG
CATGCTCCCAGCTTAATCTCCGGTGAAGGTTTTCAATCAATGAAAGATGTCCCCTTATTACAATTCACTGATATAACCCA
AATCGGCCGTGATATCAAACTGACGGCAAAACCGACAAAGGAATAG

Protein sequence :
MEEYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGEAHAEVHAIHMAGAHAEGADIYVTLEPCSHYGKT
PPCAELIINSGIKRVFVAMRDPNPLVAGRGISMIKEAGIEVREGILADQAESLNEKFLHFMRTGLPYVTLKAAASLDGKI
ATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADNPSLTCRLPNVTKQPVRVILDTVLSIPEDAKVICDQIAPTW
IFTTARADEEKKKRLSAFGVNIFTLETERIQIPDVLKILAEEGIMSVYVEGGSAVHGSFVKEGCFQEIIFYFAPKLIGGT
HAPSLISGEGFQSMKDVPLLQFTDITQIGRDIKLTAKPTKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 5e-53 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 5e-53 43