Gene Information

Name : ABLL_0312 (ABLL_0312)
Accession : YP_005552504.1
Strain : Arcobacter sp. L
Genome accession: NC_017192
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 297589 - 298839 bp
Length : 1251 bp
Strand : +
Note : -

DNA sequence : 
ATGTTAATTGCAAGTTTAATTTTTTTGATTACTTTGATATTTGTAATTTGGCAACCACGAGGTTTACAAATTGGAACAAC
TGCAATTTTAGGTGCAATTGTTGCTTTGATTTTTCAAGTTGTAAATTTTGATGATGTACTTGCTGTAACAAATATAGTTT
GGGATGCAACTTTAGCATTTATTGGAATCATAATCTTATCTATGATTTTAGACGAAATAGGATTTTTTGAGTGGGCTGCA
CTTAAAATGGCAAAGTTTTCAAATGGAAATGGAATATTGATGTTTATCTATTCTATTTTACTTGGGGCTTTTGTTTCTGC
ACTTTTTGCAAATGATGGAGCAGCGTTAATTTTAACTCCAATTTTGTTAGCAAAAATGAGAATACTAAAACTAAATACAA
AAACAATAGTTGCTTTTTTACTTGCAGGTGGATTTATAAGTGATAGTGCTTCTTTACCATTCGTATTTTCAAATCTAACA
AATATAGTAACAGCGAACTATTTTAGTATTGGATTTGTGGAATACTTTTTTAATATGATAATTCCATTTATTGTAAGTGT
AATCACTTCAATAGTTTTTTTATGGTTACTTTTACGAAAAGATATTCCCAAAACTGTGGATATAACTTTGTTAAAAGAGC
CAAAAAGTGTAATCAAAAATATGAAACTTTTTTATTTTTCTTGGTTCTTTTTAGGTTTTTTATTATGTGCATATTTTTTA
GGAGATGCTTACGATTTACCTATTTCTATTTTTGCTTTAGGTGGAGCAGTTATATTTTTAATAATTGCAACTATTTCAAA
AACTGTAAAAGCAAAACATATTATAAAAGAAGCACCATGGCAAGTTGTATGGTTTAGTATTGGACTTTATATTGTTGTTT
ATGGTTTAAAAAATGCAGGATTGACAGATGAATTAAGTCAAATTTTACAATATCTTGCAACAAAAGGTGATATGGTTGCT
GTTGTTGGAACAGGATTTATAGCTGCATTTTTAAGTGCAATTATGAATAATATGCCAACAGTAATGATTATGGATATAGC
TTTAACTGATATTTCAAATCAAGCATTGATTTATGCAAATGTTATTGGGTGTAACCTTGGACCAAAAATGACTCCATTTG
GTAGTTTAGCTACTCTTCTTTGGCTTCATGTTTTAGCAAAAAAAGGTGTAAAAATTAGCTTTTGGGAATATAGTAAATTT
GGACTTATTATAACTCCTCCAGTTTTATTAATAGTTTTATTATCAATTTAA

Protein sequence : 
MLIASLIFLITLIFVIWQPRGLQIGTTAILGAIVALIFQVVNFDDVLAVTNIVWDATLAFIGIIILSMILDEIGFFEWAA
LKMAKFSNGNGILMFIYSILLGAFVSALFANDGAALILTPILLAKMRILKLNTKTIVAFLLAGGFISDSASLPFVFSNLT
NIVTANYFSIGFVEYFFNMIIPFIVSVITSIVFLWLLLRKDIPKTVDITLLKEPKSVIKNMKLFYFSWFFLGFLLCAYFL
GDAYDLPISIFALGGAVIFLIIATISKTVKAKHIIKEAPWQVVWFSIGLYIVVYGLKNAGLTDELSQILQYLATKGDMVA
VVGTGFIAAFLSAIMNNMPTVMIMDIALTDISNQALIYANVIGCNLGPKMTPFGSLATLLWLHVLAKKGVKISFWEYSKF
GLIITPPVLLIVLLSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-103 58
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-98 57
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-100 57
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-89 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABLL_0312 YP_005552504.1 arsenical pump membrane protein BAC0575 Protein 2e-104 59
ABLL_0312 YP_005552504.1 arsenical pump membrane protein BAC0574 Protein 5e-101 58
ABLL_0312 YP_005552504.1 arsenical pump membrane protein BAC0576 Protein 3e-91 52
ABLL_0312 YP_005552504.1 arsenical pump membrane protein BAC0578 Protein 8e-92 52
ABLL_0312 YP_005552504.1 arsenical pump membrane protein BAC0031 Protein 1e-86 51
ABLL_0312 YP_005552504.1 arsenical pump membrane protein BAC0577 Protein 1e-88 50