Gene Information

Name : ABLL_2370 (ABLL_2370)
Accession : YP_005554562.1
Strain : Arcobacter sp. L
Genome accession: NC_017192
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2456634 - 2457938 bp
Length : 1305 bp
Strand : -
Note : -

DNA sequence : 
ATGAATATAGAAGATTTATTAAATAAAATTGACCCAACAAATTTATCTATTGCCTTTGGAAGAATTACAAACATTTCAAC
AACAACTTTAACAGCAACTGGTCTTGAAGTTGCTGTAGGAGATATTGTAAAAATTGAATCAGTTCAGCATCACTCTTCTG
TTTTGGGAATGGTAGCTTCAATAAATGATATTTCTTTTACAATAGTTCCTTTTTCTTTTATTGATGGTTTTAGAATACAT
GATAAAGTTTTCTTACAAAAAGATGGATTAAGTGTAAAATGTGGTTATGGTTTATTAGGAAGAGTTATAAATGCATTGGG
TGATCCAATAGATAGTAAAGGAAAGATTGTTAATTTAGAAGAAAATGCTTCAATAAATAAGATTTCTATGCCTGCGCTTG
AAAGAGGAATTATTGATAAAAAGTTTTCAACGGGTGTAAAAGCAATTGATTCAATGCTTACTTGTGGAAAAGGACAAAAA
GTTGGTATCTTTGCAGGTTCAGGAGTTGGAAAATCAACTCTAATGGGAATGATTGTAAAAGGTTGTGAAGCCCAAATAAA
AGTTGTAGCATTAATTGGAGAAAGAGGTAGAGAAATACCTGAATTTATCCATTATAATTTAGATAATAATTTGGATAATA
CAGTAATAATAGCTGCAACATCTGATGAATCAGCATTAATGCGAAAATATGGTGCTTTTACAGCAATGAGTATCGCAGAA
TTTTTTAGAGATAAAGGTCATGATGTTTTATTAATGATGGATTCTGTTACAAGATTTGCAATGGCTCAAAGAGAAATTGG
ATTAAGTACGGGAGAACCACCTGTAAGTCGTGGTTATCCACCTTCTGTTTTTGCTCTTTTACCTCAATTAATGGAAAGAG
CAGGAAATAATCAAAAAGGTTCAATTACAGCATTTTTTACGGTTTTAGTTGATGGAGATGATATGAATGATCCAATTGCT
GATCAAAGTAGATCAATTCTTGATGGACATATTGTATTAACAAGAGAGTTAACTGAACAGGGATTTTATCCACCAATTAA
TCTTCTAAAATCAGCTTCAAGAGTAATGGATAAAGTAGTTACAAAAGAACATTATAATGATTTTTTAAAGTTAAAAAGAG
TATTATCTTTGATAAAAGAGAATGAAGTTTTAGTAAGAGTTGGTGCATACAAACCAGGTATGGATCCGGAACTTGATAAT
GCAATGGCAAAAAAAGAAAAAATAAGAGAGTTCTTGACTCAAGATACTCAAAAAAATTTTAATTTTGATGAAACAGTTGC
AATTTTTAGAAAGGTTTTACAATGA

Protein sequence : 
MNIEDLLNKIDPTNLSIAFGRITNISTTTLTATGLEVAVGDIVKIESVQHHSSVLGMVASINDISFTIVPFSFIDGFRIH
DKVFLQKDGLSVKCGYGLLGRVINALGDPIDSKGKIVNLEENASINKISMPALERGIIDKKFSTGVKAIDSMLTCGKGQK
VGIFAGSGVGKSTLMGMIVKGCEAQIKVVALIGERGREIPEFIHYNLDNNLDNTVIIAATSDESALMRKYGAFTAMSIAE
FFRDKGHDVLLMMDSVTRFAMAQREIGLSTGEPPVSRGYPPSVFALLPQLMERAGNNQKGSITAFFTVLVDGDDMNDPIA
DQSRSILDGHIVLTRELTEQGFYPPINLLKSASRVMDKVVTKEHYNDFLKLKRVLSLIKENEVLVRVGAYKPGMDPELDN
AMAKKEKIREFLTQDTQKNFNFDETVAIFRKVLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-81 50
escN AAC38383.1 EscN Virulence LEE Protein 2e-80 47
escN YP_003236088.1 translocator EscN Virulence LEE Protein 6e-80 47
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-80 47
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-80 47
escN AAC31513.1 L0034 Virulence LEE Protein 1e-80 47
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-80 47
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-80 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-80 47
escN CAI43874.1 EscN protein Virulence LEE Protein 7e-81 47
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-78 47
escN YP_003223475.1 translocator EscN Virulence LEE Protein 9e-81 47
escN AAK26715.1 EscN Virulence LEE Protein 3e-80 47
escN AAL57542.1 EscN Virulence LEE Protein 3e-80 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-71 46
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-72 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-71 46
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-72 46
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-72 46
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 9e-78 45
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 9e-78 45
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 3e-75 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 9e-63 45
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-63 45
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 8e-64 45
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 8e-63 45
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-64 45
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-64 45
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 2e-64 45
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 7e-63 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 3e-68 44
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-79 42
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-79 42
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 3e-81 42
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-81 42
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-81 42
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-81 42
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-81 42
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 8e-81 41
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-80 41
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 7e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABLL_2370 YP_005554562.1 flagellum-specific ATP synthase VFG0048 Protein 3e-79 52
ABLL_2370 YP_005554562.1 flagellum-specific ATP synthase VFG0390 Protein 2e-82 50
ABLL_2370 YP_005554562.1 flagellum-specific ATP synthase VFG0192 Protein 5e-81 48
ABLL_2370 YP_005554562.1 flagellum-specific ATP synthase VFG2331 Protein 2e-68 48
ABLL_2370 YP_005554562.1 flagellum-specific ATP synthase VFG0730 Protein 1e-80 47
ABLL_2370 YP_005554562.1 flagellum-specific ATP synthase VFG0812 Protein 7e-81 47
ABLL_2370 YP_005554562.1 flagellum-specific ATP synthase VFG1254 Protein 3e-71 47
ABLL_2370 YP_005554562.1 flagellum-specific ATP synthase VFG0515 Protein 1e-72 46
ABLL_2370 YP_005554562.1 flagellum-specific ATP synthase VFG1008 Protein 1e-62 45
ABLL_2370 YP_005554562.1 flagellum-specific ATP synthase VFG2144 Protein 4e-82 43
ABLL_2370 YP_005554562.1 flagellum-specific ATP synthase VFG1778 Protein 1e-62 43