|
Name : ABLL_2329 (ABLL_2329) Accession : YP_005554521.1 Strain : Arcobacter sp. L Genome accession: NC_017192 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 2398748 - 2400253 bp Length : 1506 bp Strand : - Note : - DNA sequence : ATGAATATAAATGAAATCCATAATTTAAATCTTATAGCTTTTGAAGAAGTTGAAGATTATGTAACAGCTTTAAAAAATTA TGTTTTATATACAAAAATTGATGATAAGGTTGTAATTGCAATATCAAAAGAGTATATTAGTATTTCACTTGATTATCTTT CAAAAATAAAAACAAATGAAGAGATAATCTTTTTAGATGAAATCTCTTTTGAAAAACTTTATAATAGATTTTTAGAGATA AAAACTGATAAAGAGATGAGTGCAATTCAACAAGAACAAGAAGATGCAACCTTAAGTGATGATGATTTTTCAGTTAGTGA GTTTCTAAAAGTTGGAAGTGATATTTTAACTTCTGAAGAATCAGCTCCAATTATCAAATTTGTAAATTCACTTTTTTATC AAGCAATAAAGAAAAAATCTTCAGATATTCATATAGAAATGCATGAATTTAAAGCAGAAGTAAAATATAGAGTTGACGGA GTTTTAGTAAAACATATTGAACTTGATAAAAATATTATGTCTTTAGTTATTTCAAGAATCAAAGTTATTTCAAATCTTGA TATTTCTGAAAAAAGAGTTCCACAAGACGGAAGAACTCAAATAAAAATTGCTGGACGTACTTTGGATATTAGGGTTTCAA TTCTTCCTACTTTTTATGGGGAAAGAGTTGTTATGAGAATCTTGATGCAAAGTGAAGATATCAAAAGTGTAAAAGAATTA GGATTTCCCACTTATATAACTGATGAATTAGAAAAAACTTTACAAAACTCTTATGGTATGGTTTTAGTAACTGGTCCAAC AGGAAGTGGGAAATCAACAACTTTGCACTCGCTTTTACACCAAGTTGTAAGTGTTGAAAAAAATATCATAACTGTTGAAG ACCCAGTTGAGTATAAATCAAATGCTTTTTCTCAAATTCAAGTAAATACAAAAGTAGGGCTTACATTTGCAAGTGGTTTG AGATCGATTTTAAGACAAGATCCAGATATTATAATGGTTGGAGAGATAAGAGATAGTGAAACAGCTTCAATTGCTGTTCA ATCAGCTTTGACTGGACACTTACTCTTTTCAACACTTCATACAAATAGAGCGCCAGCAGCAATTACAAGACTTATAGATA TGGGAGTTGAAAGGTTTTTAATCTCTTCCTCTTTACTTGCAGTTCTTGCTCAAAGGTTAGTAAGAAAACTTTGTCCTATT TGTAAAGTAGAAGATGACTCAATGGCTTCACATAAATTTTTTGGTTTGGATGTAAACAAAACTATTTATAAAGCAAATGG TTGCAAAGCTTGTAATTTCACAGGTTATAGTGGAAGAGTTGCAATTGGGGAACTTTTTATTATTGATGATGAGATAAAAG AGTATTTAAAGGGTGAAGTTGATGATAATACTTTGATGAAGTTAGCCACAAAAAATGGAATGATAAGTTTAGATAAACAA CTTAAATCAATGCTAGGAAATGGTGAAACTTCAGTTGATGAAGTAATAAGAATAGGTATAAAATAG Protein sequence : MNINEIHNLNLIAFEEVEDYVTALKNYVLYTKIDDKVVIAISKEYISISLDYLSKIKTNEEIIFLDEISFEKLYNRFLEI KTDKEMSAIQQEQEDATLSDDDFSVSEFLKVGSDILTSEESAPIIKFVNSLFYQAIKKKSSDIHIEMHEFKAEVKYRVDG VLVKHIELDKNIMSLVISRIKVISNLDISEKRVPQDGRTQIKIAGRTLDIRVSILPTFYGERVVMRILMQSEDIKSVKEL GFPTYITDELEKTLQNSYGMVLVTGPTGSGKSTTLHSLLHQVVSVEKNIITVEDPVEYKSNAFSQIQVNTKVGLTFASGL RSILRQDPDIIMVGEIRDSETASIAVQSALTGHLLFSTLHTNRAPAAITRLIDMGVERFLISSSLLAVLAQRLVRKLCPI CKVEDDSMASHKFFGLDVNKTIYKANGCKACNFTGYSGRVAIGELFIIDDEIKEYLKGEVDDNTLMKLATKNGMISLDKQ LKSMLGNGETSVDEVIRIGIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-90 | 46 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-90 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ABLL_2329 | YP_005554521.1 | type II secretion system protein E | VFG1876 | Protein | 8e-87 | 48 |
| ABLL_2329 | YP_005554521.1 | type II secretion system protein E | VFG0182 | Protein | 4e-85 | 48 |
| ABLL_2329 | YP_005554521.1 | type II secretion system protein E | VFG2048 | Protein | 9e-92 | 45 |
| ABLL_2329 | YP_005554521.1 | type II secretion system protein E | VFG2426 | Protein | 5e-68 | 41 |
