Gene Information

Name : ABLL_1248 (ABLL_1248)
Accession : YP_005553440.1
Strain : Arcobacter sp. L
Genome accession: NC_017192
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1273938 - 1274666 bp
Length : 729 bp
Strand : -
Note : -

DNA sequence :
TTGAAAATTATAATTTCTCTTTTGTTTTTTTCTATTTTTGCATTTGCAGAAGATACAGCACCAATTGTAAACTTATCAGT
TGCAGCACTAAATGAACCAGCACAATTTGTAAAAACTATCAATATTGCGATTATTCTAACTTTAATGGTATTAGCTCCAA
CGTTAATACTTATGGTTACTTCATTTACAAGAATTGTAATAGTATTTTCTTTATTAAGACAAGCAATGGGATTGCAACAA
ACACCTCCTACTCAAGTTGTTATTTCTTTATCTTTAATTTTAACTATTTTTATTATGGAACCTTATGCAAAACAATCTTG
GAAAGATGGTGTAGTTCCATATATGGATGAAAAGATTGGTTATGAAGAAGCTTTTGAAAAAGGTGTTAAACCATTTAAAG
ATTTTATGATTAAAAATACAAGAGAAGCTGATTTAGCACTATTTTATAGAATAAAAAAAGAACCAAATCCTAAAAATATA
GATGATGTACCTTTAACTTTATTAATGCCAGCATTTATTGTAAGTGAATTAAGAACTGCTTTTGAAATTGGATTTTTAAT
ATTTTTACCTTTTTTAGTTATTGATATTATTGTAGCTTCAATTCTTATGAGCTTAGGGATGATGATGTTACCACCTGTTA
TGATATCCTTGCCTATAAAGATTATCTTTTTTATTGTAATTGATGGATGGCAATTAATAATTGGAAATCTAGCACAATCC
TTTAAATAA

Protein sequence :
MKIIISLLFFSIFAFAEDTAPIVNLSVAALNEPAQFVKTINIAIILTLMVLAPTLILMVTSFTRIVIVFSLLRQAMGLQQ
TPPTQVVISLSLILTIFIMEPYAKQSWKDGVVPYMDEKIGYEEAFEKGVKPFKDFMIKNTREADLALFYRIKKEPNPKNI
DDVPLTLLMPAFIVSELRTAFEIGFLIFLPFLVIDIIVASILMSLGMMMLPPVMISLPIKIIFFIVIDGWQLIIGNLAQS
FK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 6e-32 41
escR AAK26700.1 EscR Virulence LEE Protein 5e-32 41
escR AAL57527.1 EscR Virulence LEE Protein 5e-32 41
escR CAC81847.1 EscR protein Virulence LEE II Protein 5e-32 41
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 2e-31 41
escR CAI43889.1 EscR protein Virulence LEE Protein 5e-32 41
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 6e-32 41
escR AAC31528.1 L0049 Virulence LEE Protein 5e-32 41
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 6e-32 41
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 5e-32 41
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 6e-32 41
unnamed AAL06354.1 EscR Virulence LEE Protein 7e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABLL_1248 YP_005553440.1 flagellar biosynthesis protein FliP VFG2338 Protein 4e-49 52
ABLL_1248 YP_005553440.1 flagellar biosynthesis protein FliP VFG2494 Protein 1e-54 49
ABLL_1248 YP_005553440.1 flagellar biosynthesis protein FliP VFG1259 Protein 6e-54 48
ABLL_1248 YP_005553440.1 flagellar biosynthesis protein FliP VFG2016 Protein 1e-51 46
ABLL_1248 YP_005553440.1 flagellar biosynthesis protein FliP VFG0827 Protein 3e-32 41