Gene Information

Name : ydcI (BAXH7_00478)
Accession : YP_005548472.1
Strain : Bacillus amyloliquefaciens XH7
Genome accession: NC_017191
Putative virulence/resistance : Unknown
Product : transcriptional accessory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 469444 - 471603 bp
Length : 2160 bp
Strand : +
Note : COG2183 Transcriptional accessory protein

DNA sequence :
ATGGAAACGTTAGCCCTTTTGAAAAAACAAATTGCTGAAGAAACAGCTTTATCCCAAAAAAATGTCGAAAGTGTCATCCG
CCTGCTTGAAGACGGCAATACCGTTCCGTTTATTGCGCGGTACCGAAAAGAACAGACAGGCTCAATGGACGAGGTGCAGA
TTCAGGCAATCTCCGAGCGGTGGCAATACATACAAAACCTGACGCAGCGGAAAGAAGAAGTCATCAGATTGATCGCCGAA
CAGGACAAGCTGACGGACGGACTGAAACAAAAAATCGAACAAGCGGCCAAACTTCAGGAAGTCGAGGATTTATACCGTCC
CTTCAAACAAAAACGGAAAACAAAAGCGACCGTCGCCAAAAGCAAAGGGCTTGAGCCGCTTGCGGACTATATTCTTTCTC
TCCCGAAAGAAAACCGGCTCCATGAAATCGCTGATCAATATATCAGTGAAGAGAAAGAAGTCGCTACAAGAGAAGAAGCC
ATTGAAGGCGCGAAGCACATCATAGCCGAACAAATCTCGGATGATCCTCATTTTAGAAAGTGGATCCGCCAGGAAACGTA
TAAAAAAGGAATTCTCACATCCACGGCAGGCAAGTCAGCCGCAGATGACGAGAAAAACGTCTATGAAATGTATTATGAAT
ACGAAGAGCCGATCCAAAAAGTCGTTCCTCACAGAGTGCTTGCGATGAACCGCGGTGAAAAAGAAGGCATTTTAAAGATT
GCGATCGAACCGCCCGCCGATCAGTTGAAAGCTTATTTAGAAAAGCAAATCATCAAACATCGTGAAACGCCTGTGAAAGA
AACGCTGAAAGAAGCCATTGAGGACGGGTACAAACGCCTGATCCAGCCGGCTATTGAGCGTGACATCCGCAAAGAGCTGT
CAGAAAAAGCAGACGCGCAGGCGATCCATATTTTCGCTGAAAACCTGCGTAAGCTCCTGCTGCAGCCGCCGATGAAGGGG
AAAGTCGTGCTCGGCGTCGATCCGGCTTTCCGTACGGGATGCAAACTGGCAGTCGTTGACGAGACGGGAAAAGTGCTGAA
AATCGACGTTATTTATCCGCACGCTCCCGTCAAAAAGACAGCCGAAGCCCAGAAAAAAATCAAACAATTGCTGAACCGTT
ACGAAGTCGAGGTCGTGGCGATCGGAAACGGCACGGCATCAAGAGAGACAGAGCAATTCATCGTTGATGTGTTAAAAGAA
ACAGAGCGGGACATCTATTATGTTATCGTCAATGAGGCAGGGGCAAGCGTGTACTCTGCGTCAGAAATCGCCCGTGAGGA
ATTTCCGGATTTTCAGGTCGAAGAGCGGAGCGCCGTCTCCATCGCGCGGAGATTGCAGGACCCGCTGGCCGAACTTGTGA
AAATTGATCCTAAATCCGTCGGCGTCGGGCAATACCAGCATGATGTCAGCCAAAAGCACTTAAACGAATCTCTCCGTTTT
GTCGTAGAGACCGTCGTCAACCAAGTCGGGGTAAATGTCAATACAGCATCAGCAGCGCTGCTTCAATATGTAGCCGGGTT
ATCCAAAACCGTTGCCGGCAACATCGTCAAAAAAAGGGAAGAACTCGGCAAATTCACAAATCGCAAAGAGCTGAAAGAAA
TCCCGCGCCTCGGTGCAAAAACATATGAACAATGCATCGGCTTTTTGAGAGTGCCCGAAGGACAGGAACCGCTCGACCGC
ACCGGGATACACCCGGAAAGCTATAAAGAGACAAAGGCGCTGCTCAAAAAACTTCATCTCACAGCAGATCAGATCGGAAG
CGCAGACGTAAAAGAGAAAATCAGCGCACTTCCGCTGTCTGAAACGGCAGAAGAGCTAGGAATAGGGGACATTACGCTTG
CGGATATTTGCGGGCAGCTGACAAGGCCGGAGCGCGATCCTCGTGACGAAGTGCCGAAACCTTTGCTGAAAAAAGACGTT
CTGCAGCTTGAGGATTTAAAGGAAGGAATGGAATTGCAGGGCACCGTCCGCAACGTCGTAGACTTCGGCGCTTTCGTCGA
TATCGGCGTCAAGCAAGACGGGCTTGTGCACATCTCAAAACTGAGCAATCAATTCGTCAAACATCCTCTTGACGTCGTAT
CGGTCGGAGACATCGTCACCGTATGGGTCGAAGGGGTGGACGTGCAAAAAGGCAGAGTGTCGCTGTCTATGGTAAAATAA

Protein sequence :
METLALLKKQIAEETALSQKNVESVIRLLEDGNTVPFIARYRKEQTGSMDEVQIQAISERWQYIQNLTQRKEEVIRLIAE
QDKLTDGLKQKIEQAAKLQEVEDLYRPFKQKRKTKATVAKSKGLEPLADYILSLPKENRLHEIADQYISEEKEVATREEA
IEGAKHIIAEQISDDPHFRKWIRQETYKKGILTSTAGKSAADDEKNVYEMYYEYEEPIQKVVPHRVLAMNRGEKEGILKI
AIEPPADQLKAYLEKQIIKHRETPVKETLKEAIEDGYKRLIQPAIERDIRKELSEKADAQAIHIFAENLRKLLLQPPMKG
KVVLGVDPAFRTGCKLAVVDETGKVLKIDVIYPHAPVKKTAEAQKKIKQLLNRYEVEVVAIGNGTASRETEQFIVDVLKE
TERDIYYVIVNEAGASVYSASEIAREEFPDFQVEERSAVSIARRLQDPLAELVKIDPKSVGVGQYQHDVSQKHLNESLRF
VVETVVNQVGVNVNTASAALLQYVAGLSKTVAGNIVKKREELGKFTNRKELKEIPRLGAKTYEQCIGFLRVPEGQEPLDR
TGIHPESYKETKALLKKLHLTADQIGSADVKEKISALPLSETAEELGIGDITLADICGQLTRPERDPRDEVPKPLLKKDV
LQLEDLKEGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNQFVKHPLDVVSVGDIVTVWVEGVDVQKGRVSLSMVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 1e-120 43