Gene Information

Name : pdp (BAXH7_04084)
Accession : YP_005552038.1
Strain : Bacillus amyloliquefaciens XH7
Genome accession: NC_017191
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : -
COG ID : -
EC number : 2.4.2.2
Position : 3790943 - 3792244 bp
Length : 1302 bp
Strand : -
Note : COG0213 Thymidine phosphorylase

DNA sequence :
ATGAGAATGGTAGATCTTATTGTAAAAAAACAAAACGGTAAAGAACTGACAACAGAAGAAATTCAATTTTTTGTAAAGGG
ATATACGGACGGAAGCATTCCTGATTATCAGGCAAGCGCGCTGGCTATGGCGATTTACTTTCAGGATATGACGGATCAGG
AGCGCGCCGATCTGACAATGGCGATGGTGAATTCAGGGGAAACGATTGATCTCTCCGCCATCGAGGGCATTAAGGTCGAC
AAACACTCTACGGGCGGAGTCGGCGACACAACAACTCTCGTACTCGCACCGCTTGTCGCGGCGCTCGGCGTTCCCGTCGC
TAAAATGTCCGGCCGCGGCCTTGGCCATACGGGAGGAACCATTGATAAACTGGAAGCGATCGAAGGCTTTCACGTGGAAT
TGTCAAAAGATGAATTCATCAAGCTAGTGAACCGTGACAAGGTAGCCGTCATCGGACAAAGCGGCAACTTGACGCCCGCC
GATAAAAAGCTGTATGCCCTTCGTGATGTAACGGGTACGGTAAACTCCATCCCGCTGATCGCAAGCTCAATTATGAGTAA
AAAAATCGCTGCCGGAGCAGATGCCATCGTGCTTGACGTCAAAACGGGAGCCGGCGCGTTTATGAAGACGGATGAAGACG
CCGTGAACCTCGCCAAAGCAATGGTCCGTATCGGAAACAACGTCGGCCGCCAAACGATGGCTGTTATTTCTGACATGTCG
CAGCCGCTCGGTTTTGCGATCGGAAACGCCTTGGAAGTTCAAGAAGCCATTGATACGTTAAGAGGGGAAGGCCCTGAAGA
CTTAAACGAACTCGTCCTCACGCTCGGCAGTCAAATGGTCGTTCTGGCGAAAAAAGCCGAGACATTGGAAGAAGCGAGAA
CGAAGCTGCAGGAAGTCATGAAAAACGGCAAAGCGCTTGAAAAGTTCAAAGAGTTCCTGAGCAATCAGGGAGGGGACGCT
TCCGTCGTTGACGATCCGTCCAAACTTCCGCAGGCGGCGTACAAAATTGACGTCCCGGCAAAAGAAGCGGGTGTCGTTTC
AGAAATCGTCGCTGACGAAATCGGCGTCGCAGCGATGCTGTTAGGCGCGGGACGTGCGACAAAAGAGGACGAAATCGACC
TTGCCGTCGGTATCATGCTCCGCAAAAAAGTCGGTGACAAAGTCGAAAAAGGAGAGCCGCTCGTCACCCTTTACGCCAAC
CGCGAAAACGTTGACGACGTGACCTCCAAAGTCTATGACAACATCCGCATCTCAGAAAAAGCGGAAGCGCCGAAGCTGAT
TCATACGCTGATTACGGAATAA

Protein sequence :
MRMVDLIVKKQNGKELTTEEIQFFVKGYTDGSIPDYQASALAMAIYFQDMTDQERADLTMAMVNSGETIDLSAIEGIKVD
KHSTGGVGDTTTLVLAPLVAALGVPVAKMSGRGLGHTGGTIDKLEAIEGFHVELSKDEFIKLVNRDKVAVIGQSGNLTPA
DKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKTDEDAVNLAKAMVRIGNNVGRQTMAVISDMS
QPLGFAIGNALEVQEAIDTLRGEGPEDLNELVLTLGSQMVVLAKKAETLEEARTKLQEVMKNGKALEKFKEFLSNQGGDA
SVVDDPSKLPQAAYKIDVPAKEAGVVSEIVADEIGVAAMLLGAGRATKEDEIDLAVGIMLRKKVGDKVEKGEPLVTLYAN
RENVDDVTSKVYDNIRISEKAEAPKLIHTLITE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 8e-71 48