Gene Information

Name : ycdG (BAXH7_00269)
Accession : YP_005548265.1
Strain : Bacillus amyloliquefaciens XH7
Genome accession: NC_017191
Putative virulence/resistance : Unknown
Product : glycosidase
Function : -
COG functional category : -
COG ID : -
EC number : 3.2.1.10
Position : 262072 - 263751 bp
Length : 1680 bp
Strand : +
Note : COG0366 Glycosidases

DNA sequence :
ATGGCGAATGACTGGTGGAAAGACGCCGTTGTCTATCAAATCTATCCGCGAAGCTTCCAAGACACGAACGGCGACGGCAT
AGGCGACCTGCGGGGGGTTATCGCGCGTCTCGATTACATAAAAGAACTTGGCGCTGATGTGATATGGATCTGCCCGATTT
ACCCGTCGCCAAACGTCGATAACGGCTACGACGTGACGGATCATCAAGCGATTATGAAATCTTACGGAACGATGGAGGAC
TTTCACGATCTGCTTACGGAATGCCGCAGCCGCGGATTAAAGCTTGTGATGGATTTCGTCTTAAATCATACATCCACAGA
GCATCCTTGGTTCAAAGAAGCGGAAATGAATCCGAACAGCAAATACCGTAAATATTATTTTTGGCGGCCGGGCACCGCAG
ACGGCCCGCCGACCGATTGGGTGTCGGATTACGGACAATCCGTCTGGCAGTACGAAGAGCATACAGGTGAATATTACCTG
CATATGAACGCCGTCAAACAAGCCGATCTGAATTGGGAAAATCCCGAAATGCGGCAATCAGTGTACGAGATGATGAGATT
CTGGCTCGATAAAGGCGTGGACGGATTGCGTATTGACCAGCTCCATCTTCTGTCAAAAAAAGAATACCTGCCGCCGTATG
AAGATTATATCGCTCGCCGGGCTGATCCGAAGCCTTTCCGGCCAAACGGAGCACGGATACATGATTACTTAAAAGAAATG
ACGAAAGAGGTATTTTCCAAATATGACGTGATGTCGGTCGGCGAGGCCGGATCAGTGACGCCTGAGGAAGGGCTGGTCTA
CACGGGAACCGATGAGCATGAGCTGAATATGATTTTTCATTTTCAGCATATGGAGCTTGATCAGAAGCCGGGACAAGAGC
ATTGGGATGTAAAGCCGCTTGAGCTGTCTGACTTGAAGAAAGTGCTCACAGACTGGCAGAAAAAACTTGAGCACCAAGGC
TGGAATACGCTGTATTGGTGCAATCATGACCAGCCCCGGATCGTATCCCGGTTCGGAGACGAAGGCAAATACCGCAAAGC
ATCCGCCAAAATGCTTGCCGCCCTGCTTTATTTCATGAAAGGCACGCCGTACATTTATCAGGGAGAAGAACTCGGTATGA
CAAACGCTCCGTTTGACAGGATAGAGGATTATCAGGATATTCAGACCGTCAATATGTATCACAAAAGGGTATTTGAAATG
GGCCGTGACAGAGAGGAAGTCATGGCGTCCATCATGGCGAAAAGCCGCGACCATGCCCGTACACCGATGCAGTGGGACGG
AAGCCGAAATGCCGGATTTACAGAAGGAGAACCGTGGCTGAAGGTCAATCCCAATTACAAAACGATCAATGCAGCCGAGG
CTGAGAATGATCCCGATTCCGTATTGAACTTTTACAAAAAACTGATCCGTTTACGAAAACAGTATGCTGACGTCATAAAA
GGCAGCTACACGCTGCTGCTCCCTGATGACCCGCAGCTGTTTGTGTATGAAAGACAGGCAAACGGACAAAAGCTCATCTC
TATCAGCAATGTATCAAAAGAAGAAGCCGCCTTTTATTGGCCGGACGGTTCCGAGCCTGGAAGTGCGAAACTGCTTCTCA
GCAACTATGAAAATGCCGGAAGCGCGGATTCCTGCATAACATTCCGTCCATATGAAACAAGAGTCTATCTGCTTGCCTGA

Protein sequence :
MANDWWKDAVVYQIYPRSFQDTNGDGIGDLRGVIARLDYIKELGADVIWICPIYPSPNVDNGYDVTDHQAIMKSYGTMED
FHDLLTECRSRGLKLVMDFVLNHTSTEHPWFKEAEMNPNSKYRKYYFWRPGTADGPPTDWVSDYGQSVWQYEEHTGEYYL
HMNAVKQADLNWENPEMRQSVYEMMRFWLDKGVDGLRIDQLHLLSKKEYLPPYEDYIARRADPKPFRPNGARIHDYLKEM
TKEVFSKYDVMSVGEAGSVTPEEGLVYTGTDEHELNMIFHFQHMELDQKPGQEHWDVKPLELSDLKKVLTDWQKKLEHQG
WNTLYWCNHDQPRIVSRFGDEGKYRKASAKMLAALLYFMKGTPYIYQGEELGMTNAPFDRIEDYQDIQTVNMYHKRVFEM
GRDREEVMASIMAKSRDHARTPMQWDGSRNAGFTEGEPWLKVNPNYKTINAAEAENDPDSVLNFYKKLIRLRKQYADVIK
GSYTLLLPDDPQLFVYERQANGQKLISISNVSKEEAAFYWPDGSEPGSAKLLLSNYENAGSADSCITFRPYETRVYLLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 6e-138 49