Gene Information

Name : ribD (BAXH7_01113)
Accession : YP_005549103.1
Strain : Bacillus amyloliquefaciens XH7
Genome accession: NC_017191
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein ribD
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.4.26
Position : 1072636 - 1073751 bp
Length : 1116 bp
Strand : +
Note : COG1985 Pyrimidine reductase, riboflavin biosynthesis

DNA sequence :
ATGGAAGAATATTATATGAATACGGCAATAGAGCTTGCCAGACGCGGTGAAGGACAGACACAGCCGAATCCTCTTGTCGG
CGCCGTCGTCGTCAAAAACGGACAGATCGTCGGAATGGGCGCCCACTTGCAATACGGAGAGGCCCATGCTGAGGTGCACG
CGATCAATATGGCAGGCAGCCATGCAAAAGGCGCTGATTTGTATGTGACGCTTGAGCCTTGCAGCCATTACGGAAAAACA
CCGCCATGTGCCGAACTGATCATGAAATCAGGGATAAAAAGGGTGTTTATCGCTGTGGAAGATCCCAATCCGCTTGTAGC
CGGAAAAGGCATCACAATGCTGGAAGCAGCGGGCATCGAAGTGAAAACGGGGCTTCTCAGGCAACAGGCAGAAGAGCTGA
ATAAAATGTTTCTTCACTTCATGCGGACCGGACTTCCGTATGTCACCTTGAAAGCGGCCGCAAGCCTTGACGGGAAAACA
GCGACTGAAACCGGTGACAGCAAATGGATTACATCAGAGGCGGCAAGGCTTGATGCCCAGCAATACAGGAAATCGCATCA
AAGCATTCTTGTCGGAGCAGGCACAGTCAAAGCCGATAATCCGAGCCTGACATGCAGGCTCCCCGATGCGGTGAAGCAGC
CGGTCAGAGTCATTCTCGATACAAAGCTGACCGTTCCTGAAACGGCAAATGTGCTCACTGACGGGGCTGCGCCGACATGG
ATATTTACAGCCGCAGGTTCTGACGTCCGAAAGAAAGACCGGCTGACCGCACTCGGAATAAAAGTCTTTACGCTTGAAAC
AGACCGCATTCACATCCCTGAGGTGCTCAGCATTCTCGCTGAAAACGGCATAATGTCCGTTTATGTGGAAGGAGGAGCAT
CTGTACACGGAAGTTTTGTCAAGGCGGGCTGTTTCGACGAGCTTCATTTCTATTTCGCCCCTACATTAATCGGAGGAACG
CTTGCTCCCAGCTTGATCTCCGGTGAAGGTTTTCAATCAATGAAAGATGTCCCCCATTTACAATTCACACAAATTACCCA
AATCGGGCCGGATATAAAACTGACGGCCATACCTAAAGATGGAAAGGATGGTGACGATGTTTACAGGAATCGTTGA

Protein sequence :
MEEYYMNTAIELARRGEGQTQPNPLVGAVVVKNGQIVGMGAHLQYGEAHAEVHAINMAGSHAKGADLYVTLEPCSHYGKT
PPCAELIMKSGIKRVFIAVEDPNPLVAGKGITMLEAAGIEVKTGLLRQQAEELNKMFLHFMRTGLPYVTLKAAASLDGKT
ATETGDSKWITSEAARLDAQQYRKSHQSILVGAGTVKADNPSLTCRLPDAVKQPVRVILDTKLTVPETANVLTDGAAPTW
IFTAAGSDVRKKDRLTALGIKVFTLETDRIHIPEVLSILAENGIMSVYVEGGASVHGSFVKAGCFDELHFYFAPTLIGGT
LAPSLISGEGFQSMKDVPHLQFTQITQIGPDIKLTAIPKDGKDGDDVYRNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-54 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-54 43