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Name : ydcI (LL3_00476) Accession : YP_005544252.1 Strain : Bacillus amyloliquefaciens LL3 Genome accession: NC_017190 Putative virulence/resistance : Unknown Product : RNA binding protein containing S1 RNA binding domain,YdcI Function : - COG functional category : - COG ID : - EC number : - Position : 468147 - 470306 bp Length : 2160 bp Strand : + Note : - DNA sequence : ATGGAAACGTTAGCCCTTTTGAAAAAACAAATTGCTGAAGAAACAGCTTTATCCCAAAAAAATGTCGAAAGTGTCATCCG CCTGCTTGAAGACGGCAATACCGTTCCGTTTATTGCGCGGTACCGAAAAGAACAGACAGGCTCAATGGACGAGGTGCAGA TTCAGGCAATCTCCGAGCGGTGGCAATACATACAAAACCTGACGCAGCGGAAAGAAGAAGTCATCAGATTGATCGCCGAA CAGGACAAGCTGACGGACGGACTGAAACAAAAAATCGAACAAGCGGCCAAACTTCAGGAAGTCGAGGATTTATACCGTCC CTTCAAACAAAAACGGAAAACAAAAGCGACCGTCGCCAAAAGCAAAGGGCTTGAGCCGCTTGCGGACTATATTCTTTCTC TCCCGAAAGAAAACCGGCTCCATGAAATCGCTGATCAATATATCAGTGAAGAGAAAGAAGTCGCTACAAGAGAAGAAGCC ATTGAAGGCGCGAAGCACATCATAGCCGAACAAATCTCGGATGATCCTCATTTTAGAAAGTGGATCCGCCAGGAAACGTA TAAAAAAGGAATTCTCACATCCACGGCAGGCAAGTCAGCCGCAGATGACGAGAAAAACGTCTATGAAATGTATTATGAAT ACGAAGAGCCGATCCAAAAAGTCGTTCCTCACAGAGTGCTTGCGATGAACCGCGGTGAAAAAGAAGGCATTTTAAAGATT GCGATCGAACCGCCCGCCGATCAGTTGAAAGCTTATTTAGAAAAGCAAATCATCAAACATCGTGAAACGCCTGTGAAAGA AACGCTGAAAGAAGCCATTGAGGACGGGTACAAACGCCTGATCCAGCCGGCTATTGAGCGTGACATCCGCAAAGAGCTGT CAGAAAAAGCAGACGCGCAGGCGATCCATATTTTCGCTGAAAACCTGCGTAAGCTCCTGCTGCAGCCGCCGATGAAGGGG AAAGTCGTGCTCGGCGTCGATCCGGCTTTCCGTACGGGATGCAAACTGGCAGTCGTTGACGAGACGGGAAAAGTGCTGAA AATCGACGTTATTTATCCGCACGCTCCCGTCAAAAAGACAGCCGAAGCCCAGAAAAAAATCAAACAATTGCTGAACCGTT ACGAAGTCGAGGTCGTGGCGATCGGAAACGGCACGGCATCAAGAGAGACAGAGCAATTCATCGTTGATGTGTTAAAAGAA ACAGAGCGGGACATCTATTATGTTATCGTCAATGAGGCAGGGGCAAGCGTGTACTCTGCGTCAGAAATCGCCCGTGAGGA ATTTCCGGATTTTCAGGTCGAAGAGCGGAGCGCCGTCTCCATCGCGCGGAGATTGCAGGACCCGCTGGCCGAACTTGTGA AAATTGATCCTAAATCCGTCGGCGTCGGGCAATACCAGCATGATGTCAGCCAAAAGCACTTAAACGAATCTCTCCGTTTT GTCGTAGAGACCGTCGTCAACCAAGTCGGGGTAAATGTCAATACAGCATCAGCAGCGCTGCTTCAATATGTAGCCGGGTT ATCCAAAACCGTTGCCGGCAACATCGTCAAAAAAAGGGAAGAACTCGGCAAATTCACAAATCGCAAAGAGCTGAAAGAAA TCCCGCGCCTCGGTGCAAAAACATATGAACAATGCATCGGCTTTTTGAGAGTGCCCGAAGGACAGGAACCGCTCGACCGC ACCGGGATACACCCGGAAAGCTATAAAGAGACAAAGGCGCTGCTCAAAAAACTTCATCTCACAGCAGATCAGATCGGAAG CGCAGACGTAAAAGAGAAAATCAGCGCACTTCCGCTGTCTGAAACGGCAGAAGAGCTAGGAATAGGGGACATTACGCTTG CGGATATTTGCGGGCAGCTGACAAGGCCGGAGCGCGATCCTCGTGACGAAGTGCCGAAACCTTTGCTGAAAAAAGACGTT CTGCAGCTTGAGGATTTAAAGGAAGGAATGGAATTGCAGGGCACCGTCCGCAACGTCGTAGACTTCGGCGCTTTCGTCGA TATCGGCGTCAAGCAAGACGGGCTTGTGCACATCTCAAAACTGAGCAATCAATTCGTCAAACATCCTCTTGACGTCGTAT CGGTCGGAGACATCGTCACCGTATGGGTCGAAGGGGTGGACGTGCAAAAAGGCAGAGTGTCGCTGTCTATGGTAAAATAA Protein sequence : METLALLKKQIAEETALSQKNVESVIRLLEDGNTVPFIARYRKEQTGSMDEVQIQAISERWQYIQNLTQRKEEVIRLIAE QDKLTDGLKQKIEQAAKLQEVEDLYRPFKQKRKTKATVAKSKGLEPLADYILSLPKENRLHEIADQYISEEKEVATREEA IEGAKHIIAEQISDDPHFRKWIRQETYKKGILTSTAGKSAADDEKNVYEMYYEYEEPIQKVVPHRVLAMNRGEKEGILKI AIEPPADQLKAYLEKQIIKHRETPVKETLKEAIEDGYKRLIQPAIERDIRKELSEKADAQAIHIFAENLRKLLLQPPMKG KVVLGVDPAFRTGCKLAVVDETGKVLKIDVIYPHAPVKKTAEAQKKIKQLLNRYEVEVVAIGNGTASRETEQFIVDVLKE TERDIYYVIVNEAGASVYSASEIAREEFPDFQVEERSAVSIARRLQDPLAELVKIDPKSVGVGQYQHDVSQKHLNESLRF VVETVVNQVGVNVNTASAALLQYVAGLSKTVAGNIVKKREELGKFTNRKELKEIPRLGAKTYEQCIGFLRVPEGQEPLDR TGIHPESYKETKALLKKLHLTADQIGSADVKEKISALPLSETAEELGIGDITLADICGQLTRPERDPRDEVPKPLLKKDV LQLEDLKEGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNQFVKHPLDVVSVGDIVTVWVEGVDVQKGRVSLSMVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 1e-120 | 43 |
