Gene Information

Name : ytrE (LL3_03118)
Accession : YP_005546877.1
Strain : Bacillus amyloliquefaciens LL3
Genome accession: NC_017190
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2928956 - 2929651 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence : 
GTGATAGATGTACAGCATATCGATCATTCATTTAAAATCGGCAGGAAAGGCAGAGAGAGTGCGGTTCCGGTGCTGAAGGA
TGTCTCTTTGACCGTTGAAAAAGGGGAAATCGCCTGTATCGTCGGGCGGAGCGGTTCCGGAAAATCAACGCTTCTGAATT
TAATTTCCGGCTATATAGCACCGACGAAGGGCCGTATCGTCATTAACGGCACTGATGTGACAGGCTTCAGTGAAAAAGAG
TGGGCGCAGTTCCGCCTTGGGCATTTCGGTTTCATTTTTCAAAGTTTTCAGCTCATTCCGAGTCTGACAACCTATGAAAA
TGTTGAAATGCCGCTTGCCCTCAAAGGCGTAAAACCTTCTGAACGCAAGCAGAAAGTCGCGGATATGCTGAAACGGGTCG
GTCTTGAAAATCATGCGAATCATTATCCGAATGAGCTGTCAGGCGGTCAGCAGCAGCGTGTCAGTATCGCAAGGGCGCTG
ATTTTAAATCCGTCGATTATTTTAGCCGATGAGCCGACGGGAAGCCTTGATTCAGAAACGGAGCTTGAGGTGCTTGCATT
AATTCAGCAGCTGAACCGGGAGCGCGGAATTACATTTGTCATCATTACGCATGACGATGAAGTCGCTTCCATTGCTCATT
CAAAATTCCAGCTGCATGACGGTGTATTAAAAGGGGGCGTTACAGTTGAGATTTAA

Protein sequence : 
MIDVQHIDHSFKIGRKGRESAVPVLKDVSLTVEKGEIACIVGRSGSGKSTLLNLISGYIAPTKGRIVINGTDVTGFSEKE
WAQFRLGHFGFIFQSFQLIPSLTTYENVEMPLALKGVKPSERKQKVADMLKRVGLENHANHYPNELSGGQQQRVSIARAL
ILNPSIILADEPTGSLDSETELEVLALIQQLNRERGITFVIITHDDEVASIAHSKFQLHDGVLKGGVTVEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-32 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ytrE YP_005546877.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-41 47
ytrE YP_005546877.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-38 45
ytrE YP_005546877.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-37 43
ytrE YP_005546877.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-41 43
ytrE YP_005546877.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 4e-23 42