Gene Information

Name : polA (LL3_02997)
Accession : YP_005546756.1
Strain : Bacillus amyloliquefaciens LL3
Genome accession: NC_017190
Putative virulence/resistance : Unknown
Product : DNA polymerase I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2811259 - 2813898 bp
Length : 2640 bp
Strand : -
Note : -

DNA sequence :
ATGACGGAACGAAAAAAATTAGTGCTTGTCGACGGAAACAGTCTGGCGTACCGGGCGTTTTTTGCATTGCCGCTTTTAAG
CAATGAAAAAGGCATTCATACAAATGCCGTATACGGCTTTGCTATGATTTTAATGAAAATGCTGGAGGATGAAAAACCGA
CCCACATGCTGGTGGCTTTTGACGCGGGAAAAACGACTTTCCGCCACAGCACGTTTAAAGAATATAAAGGCGGAAGACAA
AAAACGCCGCCGGAGCTTTCAGAACAGATGCCGTTCATCCGCGAGCTCCTTGATGCATACAACATCAGCCGCTATGAGCT
TCCTGAATACGAAGCGGATGATATTATCGGCACGCTTGCCGTATCTGCTGAAAAAGACGGCTTCGAAGTAAAGGTATTTT
CCGGAGACAAAGACTTAACGCAGCTTGCCACCGGAAAAACGACCGTTGCCATTACGAGAAAAGGCATTACCGACGTGGAA
GATTACACGCCGGAGCACGTCGAAGAAAAGTATGGTCTGACACCTCTGCAAATTATTGATATGAAGGGATTAATGGGGGA
TTCATCCGATAACATACCGGGCGTTCCCGGCGTGGGAGAAAAAACCGCGATTAAGCTCTTAAAGCAGTTCCATTCCGTTG
AGAAACTGCTTGATTCAATTGATGAAGTCAGCGGAAAAAAATTAAAAGAAAAGCTCGGGGAATATAAAGAACAAGCCTTG
ATGAGCAAAGAGCTGGCGACGATTATGACAAATGCGCCGATTGAAGTCAAGCTCGAAGATTTAGATTATCAAGGGTTTGA
CCGTGAACAAGTTGTCGCCATATTTAAAGACCTCGGTTTTAACACGCTTCTTGAACGGCTCGGTGAAGAAAGCGGAGAAA
CTGCGGAAGAAGACTTTGAGGACATCGATGTTGAAACGGTTGAAGAAATCACCGAAGACATGCTCGTTTCGCCGTCCGCT
TTAGTCGTCGAACAAATCGGTGATAACTATCATGAAGAACCGATTCTCGGCTTTTCCATCGTGAATGAAACAGGCCTTTA
TTATATTCCGAAAGAAACAGCCATTCAGTCCGAAGCGTTTAAATCCTGGGCTGAAGATGAGTCGAAGAAAAAGTGGGTGT
TTGACAGTAAACGCTCCGTCGTCGCTCTGCGCTGGCAGGGAATTGAGCTGAAGGGAACGGAATTTGACGCGCTTCTCGCG
GCCTACATTATTAACCCGGGCAATTCGTACGACGATGTCGCGAGCGTTGCGAAAGAATACGGGCTGAATATCGTTTCCAA
AGACGAAGCGGTTTACGGAAAGGGCGCAAAGCACGCCGTTCCGGCTGAAAAAGAGCTTGCCGACCATCTCGCGCGAAAAG
CGGCTGCCGTTAACAGCCTCCGGGATAAGCTGCTGCACGCGCTCAAAGAAAATAATCAGCTTGAACTGTATGAAGATCTC
GAACTCCCGCTTGCGCTGATTCTCGGAGAAATGGAATCTATGGGCGTTAAAGTGGATGTTGAAAGACTGAAGCGAATGGG
TGAAGAGCTCCGCGCGAAACTGAAAGAATATGAAGAAAAAATCCATGACATCGCCGGTGAACCGTTTAACATCAATTCAC
CAAAACAGCTCGGCGTCATTTTGTTTGACAAGCTCGGCCTGCCGGTAGTGAAGAAAACAAAAACAGGCTATTCCACTTCA
GCCGATGTGCTGGAGAAGCTTGCCGACAAACATGATATCGTCGCTTATATTCTGCAATACAGACAAATCGGCAAACTTCA
ATCGACCTATATAGAAGGGCTGCTGAAAGTCACGCGCAAGGATTCTCATAAGGTGCATACACGATTCAATCAGGCATTGA
CTCAAACCGGGCGCCTCAGCTCAACGGATCCGAACCTGCAAAACATTCCGATCCGGCTGGAGGAAGGGCGCAAAATCCGT
CAGGCTTTCGTTCCGTCAGAACCGGACTGGCTTATTTTTGCCGCCGACTACTCACAAATTGAATTGAGGGTGCTTGCGCA
CATTTCTAAAGATGAAAATCTGATTGAGGCGTTTACGAATGACATGGATATTCATACAAAAACCGCAATGGATGTGTTTC
ATGTCAGTGAAGATGAAGTGACACAAGCGATGCGCCGCCAGGCAAAGGCTGTCAATTTCGGCATCGTTTACGGCATCAGT
GATTACGGTCTGTCGCAAAACCTCGGCATTACCCGGAAAGAAGCGGGCGCTTTTATTGACCGCTACCTGGAGAGCTTCCC
GGGTGTCAAGGCGTATATGGAAGAATCGGTGCAGGAAGCGAAGCAAAAAGGATATGTTACGACACTCATGCAGCGCCGCC
GTTATATCCCTGAGCTGACCAGCCGCAACTTCAACCTGCGGAGCTTTGCGGAACGCACGGCCATGAATACGCCGATTCAG
GGCAGCGCCGCCGATATTATTAAAAAAGCCATGATTGATATGGCAGCTGAGCTGAAAGAGAAAAATCTGAAGGCAAGACT
GCTGCTGCAGGTGCACGATGAATTGATTTTTGAAGCGCCTAAGGAAGAAATTAAAATATTAGAGAAGCTGGTTCCTGAAG
TGATGGAACATGCTTTGGATTTAGACGTGCCGTTAAAGGCGGATTATGCTTCAGGCCCGTCTTGGTACGATGCAAAATAA

Protein sequence :
MTERKKLVLVDGNSLAYRAFFALPLLSNEKGIHTNAVYGFAMILMKMLEDEKPTHMLVAFDAGKTTFRHSTFKEYKGGRQ
KTPPELSEQMPFIRELLDAYNISRYELPEYEADDIIGTLAVSAEKDGFEVKVFSGDKDLTQLATGKTTVAITRKGITDVE
DYTPEHVEEKYGLTPLQIIDMKGLMGDSSDNIPGVPGVGEKTAIKLLKQFHSVEKLLDSIDEVSGKKLKEKLGEYKEQAL
MSKELATIMTNAPIEVKLEDLDYQGFDREQVVAIFKDLGFNTLLERLGEESGETAEEDFEDIDVETVEEITEDMLVSPSA
LVVEQIGDNYHEEPILGFSIVNETGLYYIPKETAIQSEAFKSWAEDESKKKWVFDSKRSVVALRWQGIELKGTEFDALLA
AYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKHAVPAEKELADHLARKAAAVNSLRDKLLHALKENNQLELYEDL
ELPLALILGEMESMGVKVDVERLKRMGEELRAKLKEYEEKIHDIAGEPFNINSPKQLGVILFDKLGLPVVKKTKTGYSTS
ADVLEKLADKHDIVAYILQYRQIGKLQSTYIEGLLKVTRKDSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIR
QAFVPSEPDWLIFAADYSQIELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGIS
DYGLSQNLGITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSFAERTAMNTPIQ
GSAADIIKKAMIDMAAELKEKNLKARLLLQVHDELIFEAPKEEIKILEKLVPEVMEHALDLDVPLKADYASGPSWYDAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 0.0 50