Gene Information

Name : hemC (LL3_02901)
Accession : YP_005546660.1
Strain : Bacillus amyloliquefaciens LL3
Genome accession: NC_017190
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2715917 - 2716858 bp
Length : 942 bp
Strand : -
Note : -

DNA sequence :
ATGAGAACGATTAAGGTAGGTTCCAGACGGAGCAAACTGGCTATGACCCAGACAAAATGGGTGATTAACAAACTAAAGGA
ATTGAATCCTTCGTATAACTTTGAAATTCAGGAGATTGTCACAAAAGGCGACCGCATCCTTGATGTCACACTGTCAAAAG
TGGGCGGCAAAGGTCTGTTTGTCAAAGAGATTGAACAGGCGCTGTTACATCAGGAGATTGATATGGCGGTCCACAGCATG
AAAGACATGCCTGCTGTTTTGCCTGAAGGTCTGGTCATCGGCTGCATACCGAAACGTGAGGACCCGCGTGATGCGCTGAT
TTCCAAGGGGCATCAAAAGCTGGACGACATAAAAGAAGGCGGCATCATCGGCACGAGCAGTTTAAGAAGAAGCGCCCAGA
TTCTTGCTGAGCGCCCTGATCTTACTATTAAATGGATCAGAGGCAACATAGATACGAGACTTCAAAAGCTTGAGACGGAA
GATTATGATGCTATTATTTTAGCTGCTGCGGGTCTTTCAAGAATGGGCTGGAAAGATGATGTCGTATCTGAATTCCTCGA
ACCGGACCGCTGTCTGCCTGCGGTAGGCCAAGGCGCTCTTGCCATTGAATGCAGAGAGTCGGATGAGGAGCTTTTGAAGC
TGTTTGCGCAATTCACCGATGAGTATACGAAACGCACGGTGGCAGCCGAACGGGCTTTCTTGCACGCGATGGAAGGCGGC
TGCCAAGTGCCGATTGCCGGGTATGCGTCCGTCAATGACCGGGATGAGGTTGAATTGGTCGGTCTTGTTGCGTCTCCGGA
CGGTAAGACGATTTATAAAGAAACAGCGGCGGGACATGATCCGGAAGAAATCGGGAAACGCTGTGCGGCGATGATGTCTG
AAAAAGGAGCCAAAGCATTAATCGACAGCGTAAAACAGGAGCTCGATCAGGATGGCAAATGA

Protein sequence :
MRTIKVGSRRSKLAMTQTKWVINKLKELNPSYNFEIQEIVTKGDRILDVTLSKVGGKGLFVKEIEQALLHQEIDMAVHSM
KDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDDIKEGGIIGTSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETE
DYDAIILAAAGLSRMGWKDDVVSEFLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTKRTVAAERAFLHAMEGG
CQVPIAGYASVNDRDEVELVGLVASPDGKTIYKETAAGHDPEEIGKRCAAMMSEKGAKALIDSVKQELDQDGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-60 48
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-60 48