Gene Information

Name : ripX (LL3_02535)
Accession : YP_005546296.1
Strain : Bacillus amyloliquefaciens LL3
Genome accession: NC_017190
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase for chromosome partitioning
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2402043 - 2402933 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence :
GTGAAGGATCAAATTAAGGATTTCATCCATTATGTGAGGGTTGAAAGAGGGCTGTCCCAAAATACGATGATGTCCTATGA
GCGTGATCTGAAAAGTTATTCTCTCTTCTTAACTGAAACCCTTCAGATCACTTCATGGAATGATGTGACCCGTCTTCATA
TTATTCAATATTTAAAGCATTTAAAGGACTCCGGAAAATCCGGTAAGACGTCTGCCAGACATTTGGCGTCGATCCGGTCT
TTTCATCAGTTTCTGTTAAGGGAAAAAGCCGCGGATAAAGATCCTTCGGTACATATTGAAACACAAAAAACAGAGCGGGC
GCTTCCAAAAGTGCTGGCGCTGCAAGAAGTAGAGCGGTTATTGGACACGCCTAAGCTTGACAGTCCGTTCGGTCTCAGGG
ATAAAGCCATGCTTGAACTGCTGTATGCAACGGGTATCAGGGTCAGCGAGATGATCGAGCTGAAATTATCTGATGTCCAT
TTGACGATGGGATTTGTCCGCTGCTTCGGAAAAGGGCGGAAAGAGCGGATTGTGCCCATCGGTGAAGCCGCCTCCCATGC
GATCGAAGCGTACATTGAAAAAGCCAGAGGGAAATTATTAAAGAAAAACGTGACCGAAGCACTTTTTCTGAATCATCACG
GCCGCCAGATCAGCCGGCAGGGATTCTGGAAAAACCTGAAAAAAATCGCACTTGAGGCGGGCATTAAAAAAGAACTGACA
CCGCACACGCTCCGGCACTCTTTTGCAACGCACCTGCTTGAAAACGGGGCGGACCTGCGCGCCGTACAGGAGATGCTCGG
ACATGCCGATATTTCCACGACGCAAATTTACACGCATGTGTCGAAAACAAGGCTGAAGGACGTGTACAAGCAGTATCATC
CGCGCGCTTAG

Protein sequence :
MKDQIKDFIHYVRVERGLSQNTMMSYERDLKSYSLFLTETLQITSWNDVTRLHIIQYLKHLKDSGKSGKTSARHLASIRS
FHQFLLREKAADKDPSVHIETQKTERALPKVLALQEVERLLDTPKLDSPFGLRDKAMLELLYATGIRVSEMIELKLSDVH
LTMGFVRCFGKGRKERIVPIGEAASHAIEAYIEKARGKLLKKNVTEALFLNHHGRQISRQGFWKNLKKIALEAGIKKELT
PHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHVSKTRLKDVYKQYHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-55 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-55 44