Gene Information

Name : ribD (LL3_02512)
Accession : YP_005546273.1
Strain : Bacillus amyloliquefaciens LL3
Genome accession: NC_017190
Putative virulence/resistance : Unknown
Product : fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2385327 - 2386442 bp
Length : 1116 bp
Strand : -
Note : -

DNA sequence :
ATGGAAGAATATTATATGAATACGGCAATAGAGCTTGCCAGACGCGGTGAAGGACAGACACAGCCGAATCCTCTTGTCGG
CGCCGTCGTCGTCAAAAACGGACAGATCGTCGGAATGGGCGCCCACTTGCAATACGGAGAGGCCCATGCTGAGGTGCACG
CGATCAATATGGCAGGCAGCCATGCAAAAGGCGCTGATTTGTATGTGACGCTTGAGCCTTGCAGCCATTACGGAAAAACA
CCGCCATGTGCCGAACTGATCATGAAATCAGGGATAAAAAGGGTGTTTATCGCTGTGGAAGATCCCAATCCGCTTGTAGC
CGGAAAAGGCATCACAATGCTGGAAGCAGCGGGCATCGAAGTGAAAACGGGGCTTCTCAGGCAACAGGCAGAAGAGCTGA
ATAAAATGTTTCTTCACTTCATGCGGACCGGACTTCCGTATGTCACCTTGAAAGCGGCCGCAAGCCTTGACGGGAAAACA
GCGACTGAAACCGGTGACAGCAAATGGATTACATCAGAGGCGGCAAGGCTTGATGCCCAGCAATACAGGAAATCGCATCA
AAGCATTCTTGTCGGAGCAGGCACAGTCAAAGCCGATAATCCGAGCCTGACATGCAGGCTCCCCGATGCGGTGAAGCAGC
CGGTCAGAGTCATTCTCGATACAAAGCTGACCGTTCCTGAAACGGCAAATGTGCTCACTGACGGGGCTGCGCCGACATGG
ATATTTACAGCCGCAGGTTCTGACGTCCGAAAGAAAGACCGGCTGACCGCACTCGGAATAAAAGTCTTTACGCTTGAAAC
AGACCGCATTCACATCCCTGAGGTGCTCAGCATTCTCGCTGAAAACGGCATAATGTCCGTTTATGTGGAAGGAGGAGCAT
CTGTACACGGAAGTTTTGTCAAGGCGGGCTGTTTCGACGAGCTTCATTTCTATTTCGCCCCTACATTAATCGGAGGAACG
CTTGCTCCCAGCTTGATCTCCGGTGAAGGTTTTCAATCAATGAAAGATGTCCCCCATTTACAATTCACACAAATTACCCA
AATCGGGCCGGATATAAAACTGACGGCCATACCTAAAGATGGAAAGGATGGTGACGATGTTTACAGGAATCGTTGA

Protein sequence :
MEEYYMNTAIELARRGEGQTQPNPLVGAVVVKNGQIVGMGAHLQYGEAHAEVHAINMAGSHAKGADLYVTLEPCSHYGKT
PPCAELIMKSGIKRVFIAVEDPNPLVAGKGITMLEAAGIEVKTGLLRQQAEELNKMFLHFMRTGLPYVTLKAAASLDGKT
ATETGDSKWITSEAARLDAQQYRKSHQSILVGAGTVKADNPSLTCRLPDAVKQPVRVILDTKLTVPETANVLTDGAAPTW
IFTAAGSDVRKKDRLTALGIKVFTLETDRIHIPEVLSILAENGIMSVYVEGGASVHGSFVKAGCFDELHFYFAPTLIGGT
LAPSLISGEGFQSMKDVPHLQFTQITQIGPDIKLTAIPKDGKDGDDVYRNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-54 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-54 43