Gene Information

Name : LL3_02382 (LL3_02382)
Accession : YP_005546144.1
Strain : Bacillus amyloliquefaciens LL3
Genome accession: NC_017190
Putative virulence/resistance : Unknown
Product : Group II intron-encoded protein LtrA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2268659 - 2270470 bp
Length : 1812 bp
Strand : -
Note : -

DNA sequence :
GTGAGAAGTCCAGACGTAGTGTTGAACAATTTAGTTTCCAAGTCTAAAGAAGAAAATTATGTTTTTGACCGTCTTTATAG
GAATCTCTATAATCCTGAGTTTTACCTAAAGGCTTATGCCAAAATATATGCTAAGCCAGGTAACATGACGAAGGGATCGG
ACGGAAAAACTATTGACGGTTTTAGTCATAAACGCATTGATTCGTTAATTGATTCACTCAAAAATGAAACTTACCAGCCT
AAACCATCTCGAAGAGTTTATATTACAAAATCCAATGGAAAGAAGCGTCCACTTGGAATTCCATCTTTCGACGATAAGCT
CGTACAAGAAGTTGTACGAATGATCTTAGAAGCGATATATGAAGGAACGTTCCAAGACAGTTCTCATGGCTTTCGTCCGA
ATCGTAGTTGTCATACTGCACTTAAACAAGTAAAACACAGCTTTACAGGGGTGCGGTGGTTTATTGAAGGGGACATAGAA
TCTTTCTTTGATCACATCGACCATCATACGCTAATTAGTATTCTGGCGAAAAGGATTAGAGACTCAAAATTCATTAGGCT
TATATGGAAATTCCTTAGAGCTGGCTTTATAAACGACTGGAAATTCCACTCCACTTATAGTGGGACACCGCAAGGGGGAA
TTATCAGCCCACTATTGTCTAACATTTATTTGAATGAATTAGACAAGTACCTGAGGGACTATGCTAGTGGTTTCAATAAA
GCCAAAAAAAGAGCAACAAACAAGGAATACAAGCGCCGTGAGTATCTAGTTTACAAACACAGAAAAAAACTTAAAGCGTG
CTGGGACGAACTACCTTTAGAGAGAAAAAGAGAAGAGCTGAGAACGTACAAGTCGCTGAAACAGAAACTTTTAGCTGTTG
ATTTTGCTGATCCTATGGACACGAATTATAAACGAATACAATATGTTAGGTACGCCGATGATTTCATAGTTGGAATTATC
GGAAGCAAAAAGGACTGTTTGAAGATAAAGGAAGACCTTACGGTTTTTCTAAATAAAAATCTTAAATTAAATCTGTCCCA
AGAAAAGACACTAATCACAAACAGTTCAAAAAAAGCGAGATTCCTAGGATATGACATTCAAATCAAGAGAAGTTCACATA
CCAAAACAGACAAGAATGGGAACCTTAGGAAAACACAAAATCTTAGATGTAAACTCTATATGCCGGCTGAAAAGTGGATT
AATAAACTAAAGGAATATAAAGCTCTCAAAATCACCGCCGATGGAAAATGGAAGGCTGCTCATAGGACATACCTTATAAA
CCACGATGACCTTGAAATCATCAACATGTATAACTCGGAAATCCGAGGAATGTACAACTATTACAAGCTCGCTCATAACG
TTCACACACTGAATGATTTCTATTATTTTATGAAATACAGCTTTCTTAGAACCCTTGGGGCTAAGTATAAGGCGTCCGTT
GCAAGCATATATAGTCGATTCAGGCTGAATGGGAAGTTGGGGATTGCTTATAAAACTAAGGCGGGAACGAAAATAAGGTA
TTTCTATAGAGAAGGTTTTAAACGAGTGGATAATGAAGCAGACATAAGGTGCGATACGCTTCCGAATTTCGTAAGGTATG
TTGGGAGAACGAGTCTAATCGACAGATTGAGCGCTAAAAAATGCGAATACTGCGGAAAAGCAGATGTAGCGATTGAAATG
CATCATGTTAGAAAACTTAAAGACTTAAAAGGTAAGACCTTATGGGAACAACACATGATTGCAAGACAAAGGAAAACTCT
TGCTTTATGTGTAGACTGTCATAGGGACTTACACAATGGGAAACTAAACTGA

Protein sequence :
MRSPDVVLNNLVSKSKEENYVFDRLYRNLYNPEFYLKAYAKIYAKPGNMTKGSDGKTIDGFSHKRIDSLIDSLKNETYQP
KPSRRVYITKSNGKKRPLGIPSFDDKLVQEVVRMILEAIYEGTFQDSSHGFRPNRSCHTALKQVKHSFTGVRWFIEGDIE
SFFDHIDHHTLISILAKRIRDSKFIRLIWKFLRAGFINDWKFHSTYSGTPQGGIISPLLSNIYLNELDKYLRDYASGFNK
AKKRATNKEYKRREYLVYKHRKKLKACWDELPLERKREELRTYKSLKQKLLAVDFADPMDTNYKRIQYVRYADDFIVGII
GSKKDCLKIKEDLTVFLNKNLKLNLSQEKTLITNSSKKARFLGYDIQIKRSSHTKTDKNGNLRKTQNLRCKLYMPAEKWI
NKLKEYKALKITADGKWKAAHRTYLINHDDLEIINMYNSEIRGMYNYYKLAHNVHTLNDFYYFMKYSFLRTLGAKYKASV
ASIYSRFRLNGKLGIAYKTKAGTKIRYFYREGFKRVDNEADIRCDTLPNFVRYVGRTSLIDRLSAKKCEYCGKADVAIEM
HHVRKLKDLKGKTLWEQHMIARQRKTLALCVDCHRDLHNGKLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00689 YP_008394213.1 HNH endonuclease domain protein Not tested Not named Protein 5e-138 48