Gene Information

Name : yocR (LL3_02105)
Accession : YP_005545870.1
Strain : Bacillus amyloliquefaciens LL3
Genome accession: NC_017190
Putative virulence/resistance : Unknown
Product : sodium-dependent transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2050761 - 2052098 bp
Length : 1338 bp
Strand : -
Note : -

DNA sequence :
GTGAAAGAAGCTAATCAATGGTCATCTAAGCTGGGATTTATTTTAGCTACGGCCGGCTCTGCAATCGGGCTCGGCGCAAT
ATGGAAGTTCCCTTACGTAGCGGGAACCAGCGGAGGCGGCGCTTTTCTGCTCGTTTTTATTTTATTTACGATTTTAATCG
GACTGCCGCTTCTGCTTGCTGAATTTATTATCGGCAGAAAAACACAAAAAAACGCCGTTGAATCCTACAAGGCGCTTGCG
CCGGGGAAAAAGTGGCACTGGATCGGATATCTCGGAATCATTACGTGTTTTATTCTATTATCCTTCTACAGCGTAGTGGG
GGGATGGATATTAATCTACATTATAAAAGGCTTTACAGGCGGTTTATCGCTCTCATCCGGATTTGATACGTTATTTATCA
ACACCATTTCAAACCCTTATGCAGCGGTTTTCGGACAGCTGCTGTTTATCGTGATGACGATTTTAGTTGTTGCAAAAGGG
GTGAGCAGCGGCATCGAAAAAGTAAGCCAGGTGCTTATGCCGGCTCTGTTTATTCTGTTTATTCTCTTAATGATCCGCTC
CGTTTCGCTCCATGACGCAGCGAAGGGGTTAAAATTCTTCTTCATGCCTGATTTTGGCGCGATGGATGCCAATACCATAT
TATACGCGATGGGACAGTCATTTTTCTCGTTAAGCGTCGGTGTGTCCGTAATGGTTACATACAGCGCCTATTTAGAAAAA
AAAGAAAATATTGTTCAATCCGCAGTTTCGGTGACGGTATTAAATGTTCTTGTTGCCGTGATGGCGGGAGTGGCGATTTT
TCCGGCGGTGTTTTCATTCGGCCTCAAGCCGGATCAAGGCCCGCAGCTTTTATTTAACGTGCTTCCGACCATCTTTAACC
AAATGCCGTTCGGCATCGTGTTTTTACTCGCCTTTTTGCTGCTGTTTTTATTTGCGACGCTGACATCAGCATTTTCAATG
CTTGAGATTTTGGTTGCCGTTTTGTCAAAAGGCGATTCGGCAAAACGAAAGCGGTATGCATGGCTCGGGGGGCTTACAAT
ATTTATTGTCGGAGTGCCTTCGGCGCTGTCATACGGAATTTTGAGTGATGTTTCCATTTTTCACCGCAGTATTTTTGACG
CTGCGGATTTTCTGGTCAGCAATGTCTTAATGCCGCTGGGCGCGCTTTTAATTGCCGTTTTCGTACCGCTGAAAATTCCG
AAACAGGCGCTGTTTGACGAACTGAAAAGCGGTTCAGGCATAAAACGAAAATGGTTTGCAGTGTGGCTCCTATTAATCCG
TTATGTGTCTCCTGTAGCCATTATTATCGTTTTTCTGCACGTGCTCGGTATTTTTTAA

Protein sequence :
MKEANQWSSKLGFILATAGSAIGLGAIWKFPYVAGTSGGGAFLLVFILFTILIGLPLLLAEFIIGRKTQKNAVESYKALA
PGKKWHWIGYLGIITCFILLSFYSVVGGWILIYIIKGFTGGLSLSSGFDTLFINTISNPYAAVFGQLLFIVMTILVVAKG
VSSGIEKVSQVLMPALFILFILLMIRSVSLHDAAKGLKFFFMPDFGAMDANTILYAMGQSFFSLSVGVSVMVTYSAYLEK
KENIVQSAVSVTVLNVLVAVMAGVAIFPAVFSFGLKPDQGPQLLFNVLPTIFNQMPFGIVFLLAFLLLFLFATLTSAFSM
LEILVAVLSKGDSAKRKRYAWLGGLTIFIVGVPSALSYGILSDVSIFHRSIFDAADFLVSNVLMPLGALLIAVFVPLKIP
KQALFDELKSGSGIKRKWFAVWLLLIRYVSPVAIIIVFLHVLGIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0458 YP_039907.1 sodium:neurotransmitter symporter family protein Not tested vSa¥á Protein 3e-64 48
SAS0416 YP_042543.1 sodium:neurotransmitter symporter family protein Not tested vSa¥á Protein 3e-64 48