Gene Information

Name : dhaS (LL3_02102)
Accession : YP_005545867.1
Strain : Bacillus amyloliquefaciens LL3
Genome accession: NC_017190
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2046409 - 2047896 bp
Length : 1488 bp
Strand : +
Note : -

DNA sequence :
ATGAGTTCTTTAACGATGCAGATCACAAAAAGGCTGGAAACATTTTTACAGGGCACGAAGAAGCTTTATATTGACGGAAA
ATTTGTTCCGAGCGCTTCAGGAGCAACATTTGTCACGCCGAATCCGGCAACCGGAGAAACATTGATGACGCTTTACGAGG
CACAGGCTGAAGACATTGACAGCGCAGTGAAAGCTGCACGCAAAGCCTTTGATCACGGCGAATGGCGCACTATGCCGGCC
GCTTCCAGAAGCAGGCTGATGTATAAGCTTGCCGATTTAATGGAAGAGCACAAAACTGAACTCGCGCAGCTTGAAACACT
TGATAACGGAAAACCGATTAATGAAACGACGAATGGAGATATCCCGCTGGCAATCGAGCATATGCGTTATTATGCCGGGT
GGTCCACAAAGATAACCGGACAAACGATCCCGGTCGCCGGCTCATATTTTAATTACACCCGCCATGAGCCTGTCGGCGTC
GTGGGGCAAATCATCCCTTGGAACTTCCCGCTCCTTATGGCGATGTGGAAAATGGGCGCCGCCCTTGCCACAGGCTGCAC
AATCGTTTTGAAACCGGCAGAGCAGACACCCCTGACCGCCCTCTATTTAGCGGAATTAATAGATCAGGCGGGCTTCCCTG
ACGGCGTCATCAATATTGTTCCCGGGTTCGGCGAGACAGCCGGGGAAGCGCTGACCAACCATGACGATGTTGATAAACTC
GCTTTTACCGGTTCTACAGAAATCGGCAAAAAGATCATGGAGAAAGCCGCGAAAAATATTAAGCGCGTAACGCTGGAGCT
TGGCGGTAAGTCACCTAACATCATTTTACCTGACGCCAATTTGAAAAAAGCCATTCCCGGCGCTTTAAACGGGGTTATGT
TTAATCAGGGGCAGGTATGCTGTGCAGGCTCCCGTGTCTTCATTCACAAAGACAAATATGATGAAGTCGTAAGCGAAATG
GTTTCATATGCGAAATCACTTCGGCAAGGAGCCGGCCTTCATCAGGATACCCAAATCGGGCCGCTCGTCAGCCAGGAACA
GCATGAGCGCGTGCTTTCTTATATTGAAAAAGGAAAAACGGAAGGCGCCAAAGCTGTCACAGGCGGAAGCTGCCCGTTTG
AAGAAGGGTATTTTGTCTCCCCGACCGTATTTGCGGATGTGGATGACAGCATGACCATCGCAACAGAAGAAATTTTCGGC
CCGGTTTTAGCCGCCATTCCGTATGATACGGTTGATGAAGTTATTGAGCGGGCGAACCGCTCGGAATACGGCCTTGCAGC
CGGACTATGGACCGAGAATGTGAAAAACGCCCATTACATTGCTGACCGTCTACAGGCCGGCACCGTTTGGGTCAACTGCT
ACAATGTTTTTGATGCGGCGTCACCTTTCGGCGGCTATAAGCAATCCGGCCTCGGACGGGAAATGGGCTCTTATGCGCTG
GATAATTATACAGAAGTGAAAAGCGTCTGGATCAGTCTGGAAGATTGA

Protein sequence :
MSSLTMQITKRLETFLQGTKKLYIDGKFVPSASGATFVTPNPATGETLMTLYEAQAEDIDSAVKAARKAFDHGEWRTMPA
ASRSRLMYKLADLMEEHKTELAQLETLDNGKPINETTNGDIPLAIEHMRYYAGWSTKITGQTIPVAGSYFNYTRHEPVGV
VGQIIPWNFPLLMAMWKMGAALATGCTIVLKPAEQTPLTALYLAELIDQAGFPDGVINIVPGFGETAGEALTNHDDVDKL
AFTGSTEIGKKIMEKAAKNIKRVTLELGGKSPNIILPDANLKKAIPGALNGVMFNQGQVCCAGSRVFIHKDKYDEVVSEM
VSYAKSLRQGAGLHQDTQIGPLVSQEQHERVLSYIEKGKTEGAKAVTGGSCPFEEGYFVSPTVFADVDDSMTIATEEIFG
PVLAAIPYDTVDEVIERANRSEYGLAAGLWTENVKNAHYIADRLQAGTVWVNCYNVFDAASPFGGYKQSGLGREMGSYAL
DNYTEVKSVWISLED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-94 48
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-91 45
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-93 45
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-93 45
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-93 45
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-92 45
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-78 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dhaS YP_005545867.1 aldehyde dehydrogenase VFG0082 Protein 8e-92 45