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Name : pdhD (LL3_01567) Accession : YP_005545336.1 Strain : Bacillus amyloliquefaciens LL3 Genome accession: NC_017190 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes Function : - COG functional category : - COG ID : - EC number : - Position : 1453840 - 1455252 bp Length : 1413 bp Strand : + Note : - DNA sequence : ATGGTAGTAGGAGATTTCCCTATTGAAACAGATACTCTTGTGATTGGTGCGGGACCTGGCGGCTATGTAGCTGCCATCCG CGCTGCTCAGCTTGGACAAAAAGTAACAGTCGTTGAAAAAGGAACTCTTGGTGGCGTTTGTCTGAACGTCGGCTGTATTC CTTCAAAAGCGCTTATCAATGCAGGCCATCGTTACGAGAATGCAAAACATTCAGATGACATGGGAATCACTGCTGAGAAC GTAAAAGTTGACTTTACAAAAGTCCAAGAATGGAAAGCTTCTGTTGTAAATAAGCTTACTGGCGGTGTTGCAGGTCTTTT AAAAGGAAATAAAGTCGAAGTTGTAAAAGGCGAAGCTTATTTCGTAGACAGCAACTCTGTCCGCGTAATGGATGAGAACT CTGCGCAAACATATACATTTAAAAACGCGATCATTGCTACCGGTTCTCGCCCTATCGAATTGCCAAACTTCAAATATAGC GAACGCGTTCTGAACTCTACAGGCGCACTGGCGCTTAAAGAAATTCCGAAAAAGCTCGTTGTTATCGGCGGCGGATACAT CGGTACTGAGCTTGGAACAGCGTATGCAAACTTTGGAACTGAATTGGTTATTTTAGAAGGCGGAGATGAAATTCTTCCTG GCTTCGAAAAACAAATGAGTTCTCTTGTTACCCGCAGACTGAAGAAAAAAGGCAACGTTGAAATTCATACAAGCGCTATG GCTAAAGGCGTTGAAGAAAGACCTGACGGCGTAACAGTTACATTCGAAGTAAAAGGCGAAGAAAAAACGGTTGATGCTGA TTACGTATTAATCACTGTCGGACGCCGTCCGAACACTGATGAGCTCGGTCTTGAGCAAGTCGGTATCGAAATGACTGACC GCGGTGTCATTAAAACAGACAAGCAGTGCCGCACAAACGTACCGAACATTTACGCAATCGGTGACATCATTGACGGACCT CCATTGGCTCACAAAGCGTCTTACGAAGGTAAAATCGCTGCGGAAGCTATTGCAGGAGAGCCTGCTGAAATCGATTACCT CGGTATTCCGGCGGTTGTATTCTCTGAGCCTGAACTGGCTTCTGTCGGTTACACTGAAGCACAGGCGAAAGAAGAAGGCA TTGAAGTCGTTGCTGCCAAATTCCCGTTTGCAGCAAACGGACGCGCGCTGTCTCTTAACGAAACTGACGGCTTCATGAAG CTGATCACTCGTAAAGAAGATGGTCTTGTGATCGGTGCGCAAATTGCCGGCGCAAGCGCTTCTGACATGATTTCTGAATT GAGCCTGGCGATCGAAGGCGGAATGACTGCTGAAGATATCGCAATGACAATTCACGCTCACCCGACATTGGGCGAAATCA CAATGGAAGCTGCCGAAGTAGCAATCGGAAGCCCGATCCACATCGTAAAATAA Protein sequence : MVVGDFPIETDTLVIGAGPGGYVAAIRAAQLGQKVTVVEKGTLGGVCLNVGCIPSKALINAGHRYENAKHSDDMGITAEN VKVDFTKVQEWKASVVNKLTGGVAGLLKGNKVEVVKGEAYFVDSNSVRVMDENSAQTYTFKNAIIATGSRPIELPNFKYS ERVLNSTGALALKEIPKKLVVIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAM AKGVEERPDGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVPNIYAIGDIIDGP PLAHKASYEGKIAAEAIAGEPAEIDYLGIPAVVFSEPELASVGYTEAQAKEEGIEVVAAKFPFAANGRALSLNETDGFMK LITRKEDGLVIGAQIAGASASDMISELSLAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 1e-109 | 50 |
