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Name : clpC (LL3_00088) Accession : YP_005543871.1 Strain : Bacillus amyloliquefaciens LL3 Genome accession: NC_017190 Putative virulence/resistance : Virulence Product : class III stress response ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 98691 - 101126 bp Length : 2436 bp Strand : + Note : - DNA sequence : ATGATGTTTGGAAGATTTACAGAGCGAGCTCAAAAGGTATTGGCACTGGCACAGGAAGAAGCACTGCGCTTAGGCCATAC AAATATCGGAACTGAACATATATTATTGGGGTTAGTCCGTGAAGGTGAAGGGATAGCATTTAAAGCCTTAGAAGCGCTGG GCCTCAATTCAGATAAAATGCAAAAAGAAGTGGAAAGTTTGATTGGCCGAGGACAGGAAAGCACCACATCTGTCCCTCAT TACACGCCTCGAGCAAAAAAGGTAATAGAACTCTCAATGGATGAAGCCAGAAAGCTGGGACATTCTTATGTAGGAACAGA ACACATACTTCTCGGGCTGATTCGTGAAGGTGAGGGAGTCGCCGCGAGAGTTCTGAATAATCTGGGTGTCAGTCTCAATA AGGCGAGACAGCAGGTTCTTCAGCTTCTCGGAAGCAATGAAACAGGGACATCTGGAGCCGGAACAAATAGCAGCGCAAAC ACTCCGACGCTTGACAGTCTGGCGCGTGATTTAACCGCGATTGCGAGGGAAGACAGCCTTGATCCGGTTATCGGCCGAAG CAAAGAAATTCAGCGTGTTATTGAGGTATTAAGCCGCAGAACAAAGAATAACCCCGTTCTTATTGGAGAACCGGGTGTAG GTAAAACTGCGATTGCCGAAGGCCTCGCACAGCAGATCATCAACAATGAAGTGCCGGAAATTTTACGTGATAAACGCGTA ATGACGTTAGATATGGGGACGGTTGTAGCCGGCACGAAATACCGCGGAGAATTTGAAGACCGCTTGAAAAAGGTAATGGA TGAAATACGTCAGGCCGGCAATATCATTTTATTCATTGATGAACTGCACACACTGATCGGAGCGGGAGGAGCAGAAGGTG CGATTGACGCGTCGAATATTTTAAAACCTTCATTGGCGCGCGGAGAGCTTCAGTGCATCGGTGCGACAACGCTTGATGAA TACCGCAAATATATCGAAAAAGACGCAGCCCTGGAGCGCCGTTTCCAGCCGATTCAGGTGGATGAGCCGTCAGTCGATGA AAGCATTCAAATTTTAAAAGGACTCCGTGACCGCTATGAAGCGCATCACCGCGTATCCATTACTGATGAAGCGATCGAAG CGGCAGTTAAATTGTCCGACCGTTATATATCTGACCGCTTCCTTCCGGATAAAGCGATCGATTTAATTGACGAAGCCGGT TCAAAAGTGCGTCTCCGTTCTTTCACAACGCCTCCGAACTTAAAAGAGCTTGAGCAGAAGCTTGATGAAGTTCGCAAGGA AAAAGACGCTGCCGTTCAAAGCCAGGAATTTGAAAAAGCGGCTTCTCTTCGTGATACGGAGCAGCGCCTGAGAGAACAGG TGGAAGATACGAAAAAAACGTGGAAAGAAAAACAAGGCCAAGAGAACTCCGAAGTTTCTGTAGAGGATATCGCGATGGTT GTATCCAGCTGGACCGGGGTGCCTGTATCTAAAATTGCGCAAACGGAAACAGATAAGCTTCTCAATATGGAAAGCATTCT GCACTCTCGTGTCATTGGCCAGGATGAAGCCGTTGTAGCCGTTGCAAAGGCTGTGAGACGTGCAAGAGCCGGTCTGAAGG ATCCGAAACGTCCGATTGGTTCATTCATCTTCTTAGGTCCTACAGGCGTAGGGAAGACAGAGCTGGCAAGAGCACTGGCG GAATCCATTTTCGGTGATGAGGAAGCGATGATCAGAGTGGATATGTCCGAATACATGGAGAAACATTCGACTTCACGCCT TGTCGGTTCTCCTCCGGGATATGTCGGCTATGATGAAGGCGGCCAGCTGACAGAAAAAGTGAGAAGAAAACCTTACTCTG TCGTACTGCTTGATGAAATTGAAAAAGCGCATCCTGATGTGTTTAACATTCTCTTGCAAGTGCTTGAAGACGGACGCTTG ACTGATTCAAAAGGACGCACTGTTGATTTCCGCAACACGATCCTGATTATGACGTCAAACGTCGGAGCGAGCGAGCTGAA ACGCAACAAATATGTCGGCTTCAATGTTCAGGATGAATCACAAAACCATAAAGACATGAAAGACAAAGTGATGGGAGAGC TGAAGCGTGCCTTCAGGCCTGAGTTTATCAACCGGATTGACGAAATTATCGTCTTCCACTCCCTTGAGAAAAAACATCTT ACAGACATCGTGTCGCTTATGTCTGACCAGTTAACAAAACGTCTGAAAGAACAAGATCTCTCTATAGAGCTGACAGAAGC TGCAAAAGCAAAAGTAGCAGACGAGGGCGTCGATTTGGAATACGGCGCACGTCCGTTAAGAAGAGCGATCCAAAAGCATG TGGAGGACCGTTTATCAGAAGAGCTCCTCAGAGGCAATATTGATAAAGGGCAGCACATCGTTCTTGATGTAGAGGACGGC GAATTTGTCGTAAAAACGACTGCTAAAACGAACTAA Protein sequence : MMFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESTTSVPH YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGTSGAGTNSSAN TPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE YRKYIEKDAALERRFQPIQVDEPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMV VSSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA ESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL TDIVSLMSDQLTKRLKEQDLSIELTEAAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDG EFVVKTTAKTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005543871.1 | class III stress response ATPase | VFG0079 | Protein | 0.0 | 79 |
| clpC | YP_005543871.1 | class III stress response ATPase | VFG0080 | Protein | 4e-152 | 52 |
