Name : clpC (BAMTA208_00435) Accession : YP_005539772.1 Strain : Bacillus amyloliquefaciens TA208 Genome accession: NC_017188 Putative virulence/resistance : Virulence Product : class III stress response-related ATPase, AAA+ superfamily protein Function : - COG functional category : - COG ID : - EC number : - Position : 93882 - 96317 bp Length : 2436 bp Strand : + Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGATGTTTGGAAGATTTACAGAGCGAGCTCAAAAGGTATTGGCACTGGCACAGGAAGAAGCACTGCGCTTAGGCCATAC AAATATCGGAACTGAACATATATTATTGGGGTTAGTCCGTGAAGGTGAAGGGATAGCATTTAAAGCCTTAGAAGCGCTGG GCCTCAATTCAGATAAAATGCAAAAAGAAGTGGAAAGTTTGATTGGCCGAGGACAGGAAAGCACCACATCTGTCCCTCAT TACACGCCTCGAGCAAAAAAGGTAATAGAACTCTCAATGGATGAAGCCAGAAAGCTGGGACATTCTTATGTAGGAACAGA ACACATACTTCTCGGGCTGATTCGTGAAGGTGAGGGAGTCGCCGCGAGAGTTCTGAATAATCTGGGTGTCAGTCTCAATA AGGCGAGACAGCAGGTTCTTCAGCTTCTCGGAAGCAATGAAACAGGGACATCTGGAGCCGGAACAAATAGCAGCGCAAAC ACTCCGACGCTTGACAGTCTGGCGCGTGATTTAACCGCGATTGCGAGGGAAGACAGCCTTGATCCGGTTATCGGCCGAAG CAAAGAAATTCAGCGTGTTATTGAGGTATTAAGCCGCAGAACAAAGAATAACCCCGTTCTTATTGGAGAACCGGGTGTAG GTAAAACTGCGATTGCCGAAGGCCTCGCACAGCAGATCATCAACAATGAAGTGCCGGAAATTTTACGTGATAAACGCGTA ATGACGTTAGATATGGGGACGGTTGTAGCCGGCACGAAATACCGCGGAGAATTTGAAGACCGCTTGAAAAAGGTAATGGA TGAAATACGTCAGGCCGGCAATATCATTTTATTCATTGATGAACTGCACACACTGATCGGAGCGGGAGGAGCAGAAGGTG CGATTGACGCGTCGAATATTTTAAAACCTTCATTGGCGCGCGGAGAGCTTCAGTGCATCGGTGCGACAACGCTTGATGAA TACCGCAAATATATCGAAAAAGACGCAGCCCTGGAGCGCCGTTTCCAGCCGATTCAGGTGGATGAGCCGTCAGTCGATGA AAGCATTCAAATTTTAAAAGGACTCCGTGACCGCTATGAAGCGCATCACCGCGTATCCATTACTGATGAAGCGATCGAAG CGGCAGTTAAATTGTCCGACCGTTATATATCTGACCGCTTCCTTCCGGATAAAGCGATCGATTTAATTGACGAAGCCGGT TCAAAAGTGCGTCTCCGTTCTTTCACAACGCCTCCGAACTTAAAAGAGCTTGAGCAGAAGCTTGATGAAGTTCGCAAGGA AAAAGACGCTGCCGTTCAAAGCCAGGAATTTGAAAAAGCGGCTTCTCTTCGTGATACGGAGCAGCGCCTGAGAGAACAGG TGGAAGATACGAAAAAAACGTGGAAAGAAAAACAAGGCCAAGAGAACTCCGAAGTTTCTGTAGAGGATATCGCGATGGTT GTATCCAGCTGGACCGGGGTGCCTGTATCTAAAATTGCGCAAACGGAAACAGATAAGCTTCTCAATATGGAAAGCATTCT GCACTCTCGTGTCATTGGCCAGGATGAAGCCGTTGTAGCCGTTGCAAAGGCTGTGAGACGTGCAAGAGCCGGTCTGAAGG ATCCGAAACGTCCGATTGGTTCATTCATCTTCTTAGGTCCTACAGGCGTAGGGAAGACAGAGCTGGCAAGAGCACTGGCG GAATCCATTTTCGGTGATGAGGAAGCGATGATCAGAGTGGATATGTCCGAATACATGGAGAAACATTCGACTTCACGCCT TGTCGGTTCTCCTCCGGGATATGTCGGCTATGATGAAGGCGGCCAGCTGACAGAAAAAGTGAGAAGAAAACCTTACTCTG TCGTACTGCTTGATGAAATTGAAAAAGCGCATCCTGATGTGTTTAACATTCTCTTGCAAGTGCTTGAAGACGGACGCTTG ACTGATTCAAAAGGACGCACTGTTGATTTCCGCAACACGATCCTGATTATGACGTCAAACGTCGGAGCGAGCGAGCTGAA ACGCAACAAATATGTCGGCTTCAATGTTCAGGATGAATCACAAAACCATAAAGACATGAAAGACAAAGTGATGGGAGAGC TGAAGCGTGCCTTCAGGCCTGAGTTTATCAACCGGATTGACGAAATTATCGTCTTCCACTCCCTTGAGAAAAAACATCTT ACAGACATCGTGTCGCTTATGTCTGACCAGTTAACAAAACGTCTGAAAGAACAAGATCTCTCTATAGAGCTGACAGAAGC TGCAAAAGCAAAAGTAGCAGACGAGGGCGTCGATTTGGAATACGGCGCACGTCCGTTAAGAAGAGCGATCCAAAAGCATG TGGAGGACCGTTTATCAGAAGAGCTCCTCAGGGGCAATATTGATAAAGGGCAGCACATCGTTCTTGATGTAGAGGACGGC GAATTTGTCGTAAAAACGACTGCTAAAACGAACTAA Protein sequence : MMFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESTTSVPH YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGTSGAGTNSSAN TPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE YRKYIEKDAALERRFQPIQVDEPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMV VSSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA ESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL TDIVSLMSDQLTKRLKEQDLSIELTEAAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDG EFVVKTTAKTN |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
clpC | YP_005539772.1 | class III stress response-related ATPase, AAA+ superfamily protein | VFG0079 | Protein | 0.0 | 79 |
clpC | YP_005539772.1 | class III stress response-related ATPase, AAA+ superfamily protein | VFG0080 | Protein | 4e-152 | 52 |