Gene Information

Name : csbC (BAMTA208_20045)
Accession : YP_005543648.1
Strain : Bacillus amyloliquefaciens TA208
Genome accession: NC_017188
Putative virulence/resistance : Unknown
Product : sugar transporter CsbC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3816520 - 3817908 bp
Length : 1389 bp
Strand : +
Note : COG0477 Permeases of the major facilitator superfamily

DNA sequence :
GTGAAGAAAAACACCAAAAAATACCTGATTTACTTTTTCGGAGCATTAGGTGGGCTGCTTTACGGTTATGACACCGGCGT
GATTTCAGGGGCTTTGCTATTTATCAACAAAGATATTCCTTTGAACACGCTGACTGAGGGATTGGTCGTCAGCATGCTGC
TGCTCGGTGCGATTTTCGGGTCCGCGTTAAGCGGGACATGCTCTGACCGATGGGGCAGGAGAAAAGTCGTTTTCGTCCTT
TCACTCATATTTATTTTCGGTGCGCTTGCCTGCGCGGCTTCGCAAACCGTCACTATGCTGATCATCTCCCGTGTCATTCT
CGGGTTAGCCGTCGGCGGTTCAACGGCGCTTGTTCCCGTTTATCTTTCTGAGATGGCTCCGACGAAAATACGCGGAACGC
TCGGCACATTGAATAACTTAATGATTGTGACCGGAATTTTACTCGCATATATTGTGAATTACATATTCACCCCATTTGAA
GCTTGGCGCTGGATGGTAGGTCTCGCCGCAGTACCGGCGGCGCTATTATTAATCGGAATCGCGTTTATGCCGGAATCTCC
GAGATGGCTCGTCAAACGCGGCCGTGAACAGGAAGCCAGAAAAGTCATGGAAATGACGCACGACAAAGAGGATATCGCCG
TTGAATTGGCGGAGATGAAACAAGGAAAAGCCGAGAAAAAAGAATCGACACTCGGCTTGCTGAAAGCAAAATGGATCCGT
CCTATGCTGCTGATCGGAATCGGCCTTGCCATCTTCCAGCAGGCGGTCGGTATCAACACGGTAATTTACTATGCGCCGAC
CATCTTTACGAAGGCCGGACTCGGCACTTCGGCGTCCGTTCTCGGCACGATGGGCATCGGTGTTTTAAACGTCATCATGT
GTATCACCGCCATGATCTTAATTGACCGGATCGGCCGGAAAAAACTGCTGATGTGGGGAAGTGTCGGCATCACCTTGAGC
CTGGCGTCACTATCAGCCATTCTCCTTCTCGCCGGCCTGTCAGCTTCAACAGCTTGGCTGACCGTCCTGTTTCTCGGAAT
CTATATCGTCTTTTACCAGGCGACATGGGGTCCCGTCGTATGGGTCCTGATGCCGGAGCTGTTCCCGTCAAACGCACGCG
GAGCCGCAACTGGATTTACGACATTGATTCTGTCGGCAACCAATCTGGTCGTTTCACTGGTATTCCCGCTTATGCTGAGC
GCCATGGGCATCGGCTGGGTATTCGGAATTTTCTCAGTCATCTGCCTTACATCCTTCTTCTTCGCCGCTTACATCGTTCC
GGAAACGAAGGGCAGAAGTTTAGAAGAAATCGAAACGCACTTGAAAAAACGGTTCTCCTTAAAGAAGCGCAGCAAACAAA
ATCAAATTCTTAAACAGCGCACGCTGTAA

Protein sequence :
MKKNTKKYLIYFFGALGGLLYGYDTGVISGALLFINKDIPLNTLTEGLVVSMLLLGAIFGSALSGTCSDRWGRRKVVFVL
SLIFIFGALACAASQTVTMLIISRVILGLAVGGSTALVPVYLSEMAPTKIRGTLGTLNNLMIVTGILLAYIVNYIFTPFE
AWRWMVGLAAVPAALLLIGIAFMPESPRWLVKRGREQEARKVMEMTHDKEDIAVELAEMKQGKAEKKESTLGLLKAKWIR
PMLLIGIGLAIFQQAVGINTVIYYAPTIFTKAGLGTSASVLGTMGIGVLNVIMCITAMILIDRIGRKKLLMWGSVGITLS
LASLSAILLLAGLSASTAWLTVLFLGIYIVFYQATWGPVVWVLMPELFPSNARGAATGFTTLILSATNLVVSLVFPLMLS
AMGIGWVFGIFSVICLTSFFFAAYIVPETKGRSLEEIETHLKKRFSLKKRSKQNQILKQRTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0071 YP_251986.1 hypothetical protein Not tested SCCmec Protein 1e-92 51