Gene Information

Name : spaF (BAMTA208_17135)
Accession : YP_005543072.1
Strain : Bacillus amyloliquefaciens TA208
Genome accession: NC_017188
Putative virulence/resistance : Virulence
Product : SpaF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3248001 - 3248714 bp
Length : 714 bp
Strand : -
Note : COG1131 ABC-type multidrug transport system, ATPase component

DNA sequence :
ATGAGCAACATCTTAGAAACGAGACAGCTGCAAAAATCATTCGGCAGACAACAGGCAGTGGCTGATGTTTCTCTATCGGT
TAAGCACAACAGTATATACGGCCTGCTCGGTCCGAACGGCGCCGGAAAATCTACGACTCTTAAAATATTGACCGGCATCT
TGCGGCAAACATCCGGCGAGGTTCTGTTCGACGGGCATCCATGGAAGCGCGAAGATTTGAAAAAGACCGGTTCCCTGATT
GAAGCGCCGCCGCTTTACAGCAACCTGACAGCCGCCGAAAATCTGAAAGTCCGCTGCGTGATGCTCGGGCTTCCTGATTC
AAGAATTGCGGAAGTACTGGAAATCACGGGATTAACGGGGATCGGAAAAAAGCGAGCCGGCCAATTTTCCATGGGAATGA
AACAGCGGCTCGGCATTGCGTTAGCATTAGTAAACCGTCCGTCGCTCTTAATTCTTGACGAGCCGACAAACGGATTGGAC
CCGATGGGGATTCAGGATTTGCGGGAATTTATCCGCTCCTTGCCCGGACAGGGAATGACGGTGATTTTATCAAGCCACCT
GTTATCTGAAGTCGAGCAGATCGCAGATCATATCGGAATCATCAGTGACGGTATTTTGGGGTATCAGGGAGAAATCAGCC
GGGAAGACGATCTGGAGCGGCTGTTTCTGGAGGTAGTCAAATCAACAAGGGAGAAAGCGGGGACCGGGAAATGA

Protein sequence :
MSNILETRQLQKSFGRQQAVADVSLSVKHNSIYGLLGPNGAGKSTTLKILTGILRQTSGEVLFDGHPWKREDLKKTGSLI
EAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEITGLTGIGKKRAGQFSMGMKQRLGIALALVNRPSLLILDEPTNGLD
PMGIQDLREFIRSLPGQGMTVILSSHLLSEVEQIADHIGIISDGILGYQGEISREDDLERLFLEVVKSTREKAGTGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 2e-45 49
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 1e-43 49
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 2e-45 48
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 2e-45 48
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 2e-45 48
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 2e-45 48
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 8e-30 42
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 2e-38 41
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 1e-38 41