Gene Information

Name : smpB (BAMTA208_17070)
Accession : YP_005543059.1
Strain : Bacillus amyloliquefaciens TA208
Genome accession: NC_017188
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3238517 - 3238987 bp
Length : 471 bp
Strand : -
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGCCAAAAGGATCAGGCAAAGTATTATCACAAAACAAAAAAGCAAATCATGATTACTTTATAGAAGAAACCTATGAAAC
AGGCATCGTGCTGCAGGGGACGGAGATTAAGTCCATCCGCGCCGGCCGCGTGAACATGAAGGATTCCTTTGCGAAAATCG
AGCGCGGCGAAGTGTTCCTCCACAATATGCACATCAGCCCGTACGAGCAGGGAAACCGCTATAACCACGACCCGCTCCGG
ACGAGAAAGCTTTTGATGCACCGGAAAGAAATCAATAAGCTGATCGGCCTGACTAAAGAGAAGGGCTATTCCCTCGTGCC
ACTGAAGCTGTACTTGAAAAACGGCTTTGCCAAAGTATTAATCGGCCTCGGTAAAGGGAAGAAAACATACGATAAACGCG
AAGATTTAAAACGAAAAGACGCTAAAAGAGAAATCGAAAGAGCGTTCAGAGACAGACAAAAAGGCTTCTGA

Protein sequence :
MPKGSGKVLSQNKKANHDYFIEETYETGIVLQGTEIKSIRAGRVNMKDSFAKIERGEVFLHNMHISPYEQGNRYNHDPLR
TRKLLMHRKEINKLIGLTKEKGYSLVPLKLYLKNGFAKVLIGLGKGKKTYDKREDLKRKDAKREIERAFRDRQKGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 7e-44 63
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-33 47
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 4e-27 42