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Name : polA (BAMTA208_14285) Accession : YP_005542511.1 Strain : Bacillus amyloliquefaciens TA208 Genome accession: NC_017188 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : - COG ID : - EC number : - Position : 2726634 - 2729273 bp Length : 2640 bp Strand : - Note : COG0258 5'-3' exonuclease (including N-terminal domain of PolI) DNA sequence : ATGACGGAACGAAAAAAATTAGTGCTTGTCGACGGAAACAGTCTGGCGTACCGGGCGTTTTTTGCATTGCCGCTTTTAAG CAATGAAAAAGGCATTCATACAAATGCCGTATACGGCTTTGCTATGATTTTAATGAAAATGCTGGAGGATGAAAAACCGA CCCACATGCTGGTGGCTTTTGACGCGGGAAAAACGACTTTCCGCCACAGCACGTTTAAAGAATATAAAGGCGGAAGACAA AAAACGCCGCCGGAGCTTTCAGAACAGATGCCGTTCATCCGCGAGCTCCTTGATGCATACAACATCAGCCGCTATGAGCT TCCTGAATACGAAGCGGATGATATTATCGGCACGCTTGCCGTATCTGCTGAAAAAGACGGCTTCGAAGTAAAGGTATTTT CCGGAGACAAAGACTTAACGCAGCTTGCCACCGGAAAAACGACCGTTGCCATTACGAGAAAAGGCATTACCGACGTGGAA GATTACACGCCGGAGCACGTCGAAGAAAAGTATGGTCTGACACCTCTGCAAATTATTGATATGAAGGGATTAATGGGGGA TTCATCCGATAACATACCGGGCGTTCCCGGCGTGGGAGAAAAAACCGCGATTAAGCTCTTAAAGCAGTTCCATTCCGTTG AGAAACTGCTTGATTCAATTGATGAAGTCAGCGGAAAAAAATTAAAAGAAAAGCTCGGGGAATATAAAGAACAAGCCTTG ATGAGCAAAGAGCTGGCGACGATTATGACAAATGCGCCGATTGAAGTCAAGCTCGAAGATTTAGATTATCAAGGGTTTGA CCGTGAACAAGTTGTCGCCATATTTAAAGACCTCGGTTTTAACACGCTTCTTGAACGGCTCGGTGAAGAAAGCGGAGAAA CTGCGGAAGAAGACTTTGAGGACATCGATGTTGAAACGGTTGAAGAAATCACCGAAGACATGCTCGTTTCGCCGTCCGCT TTAGTCGTCGAACAAATCGGTGATAACTATCATGAAGAACCGATTCTCGGCTTTTCCATCGTGAATGAAACAGGCCTTTA TTATATTCCGAAAGAAACAGCCATTCAGTCCGAAGCGTTTAAATCCTGGGCTGAAGATGAGTCGAAGAAAAAGTGGGTGT TTGACAGTAAACGCTCCGTCGTCGCTCTGCGCTGGCAGGGAATTGAGCTGAAGGGAACGGAATTTGACGCGCTTCTCGCG GCCTACATTATTAACCCGGGCAATTCGTACGACGATGTCGCGAGCGTTGCGAAAGAATACGGGCTGAATATCGTTTCCAA AGACGAAGCGGTTTACGGAAAGGGCGCAAAGCACGCCGTTCCGGCTGAAAAAGAGCTTGCCGACCATCTCGCGCGAAAAG CGGCTGCCGTTAACAGCCTCCGGGATAAGCTGCTGCACGCGCTCAAAGAAAATAATCAGCTTGAACTGTATGAAGATCTC GAACTCCCGCTTGCGCTGATTCTCGGAGAAATGGAATCTATGGGCGTTAAAGTGGATGTTGAAAGACTGAAGCGAATGGG TGAAGAGCTCCGCGCGAAACTGAAAGAATATGAAGAAAAAATCCATGACATCGCCGGTGAACCGTTTAACATCAATTCAC CAAAACAGCTCGGCGTCATTTTGTTTGACAAGCTCGGCCTGCCGGTAGTGAAGAAAACAAAAACAGGCTATTCCACTTCA GCCGATGTGCTGGAGAAGCTTGCCGACAAACATGATATCGTCGCTTATATTCTGCAATACAGACAAATCGGCAAACTTCA ATCGACCTATATAGAAGGGCTGCTGAAAGTCACGCGCAAGGATTCTCATAAGGTGCATACACGATTCAATCAGGCATTGA CTCAAACCGGGCGCCTCAGCTCAACGGATCCGAACCTGCAAAACATTCCGATCCGGCTGGAGGAAGGGCGCAAAATCCGT CAGGCTTTCGTTCCGTCAGAACCGGACTGGCTTATTTTTGCCGCCGACTACTCACAAATTGAATTGAGGGTGCTTGCGCA CATTTCTAAAGATGAAAATCTGATTGAGGCGTTTACGAATGACATGGATATTCATACAAAAACCGCAATGGATGTGTTTC ATGTCAGTGAAGATGAAGTGACACAAGCGATGCGCCGCCAGGCAAAGGCTGTCAATTTCGGCATCGTTTACGGCATCAGT GATTACGGTCTGTCGCAAAACCTCGGCATTACCCGGAAAGAAGCGGGCGCTTTTATTGACCGCTACCTGGAGAGCTTCCC GGGTGTCAAGGCGTATATGGAAGAATCGGTGCAGGAAGCGAAGCAAAAAGGATATGTTACGACACTCATGCAGCGCCGCC GTTATATCCCTGAGCTGACCAGCCGCAACTTCAACCTGCGGAGCTTTGCGGAACGCACGGCCATGAATACGCCGATTCAG GGCAGCGCCGCCGATATTATTAAAAAAGCCATGATTGATATGGCAGCTGAGCTGAAAGAGAAAAATCTGAAGGCAAGACT GCTGCTGCAGGTGCACGATGAATTGATTTTTGAAGCGCCTAAGGAAGAAATTAAAATATTAGAGAAGCTGGTTCCTGAAG TGATGGAACATGCTTTGGATTTAGACGTGCCGTTAAAGGCGGATTATGCTTCAGGCCCGTCTTGGTACGATGCAAAATAA Protein sequence : MTERKKLVLVDGNSLAYRAFFALPLLSNEKGIHTNAVYGFAMILMKMLEDEKPTHMLVAFDAGKTTFRHSTFKEYKGGRQ KTPPELSEQMPFIRELLDAYNISRYELPEYEADDIIGTLAVSAEKDGFEVKVFSGDKDLTQLATGKTTVAITRKGITDVE DYTPEHVEEKYGLTPLQIIDMKGLMGDSSDNIPGVPGVGEKTAIKLLKQFHSVEKLLDSIDEVSGKKLKEKLGEYKEQAL MSKELATIMTNAPIEVKLEDLDYQGFDREQVVAIFKDLGFNTLLERLGEESGETAEEDFEDIDVETVEEITEDMLVSPSA LVVEQIGDNYHEEPILGFSIVNETGLYYIPKETAIQSEAFKSWAEDESKKKWVFDSKRSVVALRWQGIELKGTEFDALLA AYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKHAVPAEKELADHLARKAAAVNSLRDKLLHALKENNQLELYEDL ELPLALILGEMESMGVKVDVERLKRMGEELRAKLKEYEEKIHDIAGEPFNINSPKQLGVILFDKLGLPVVKKTKTGYSTS ADVLEKLADKHDIVAYILQYRQIGKLQSTYIEGLLKVTRKDSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIR QAFVPSEPDWLIFAADYSQIELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGIS DYGLSQNLGITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSFAERTAMNTPIQ GSAADIIKKAMIDMAAELKEKNLKARLLLQVHDELIFEAPKEEIKILEKLVPEVMEHALDLDVPLKADYASGPSWYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 50 |
