Gene Information

Name : rph (BAMTA208_13935)
Accession : YP_005542441.1
Strain : Bacillus amyloliquefaciens TA208
Genome accession: NC_017188
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2655432 - 2656169 bp
Length : 738 bp
Strand : -
Note : COG0689 RNase PH

DNA sequence :
ATGAGACACGACGGAAGACAGCACGATGAGCTGCGACCTATCACATTTGATTTGGATTTTATCACTCACCCGGAGGGCTC
TGTGTTAATTACAGCGGGAAATACAAAGGTCATCTGTAATGCATCAGTGGAAGACCGGGTGCCGCCATTTTTACGCGGCG
GAGGAAAAGGCTGGATCACAGCGGAATACAGCATGCTTCCCCGCGCCACGAATCAAAGAACGATAAGAGAATCTTCAAAA
GGAAAGGTTTCCGGAAGAACGATGGAAATCCAGCGTCTGATCGGGCGCGCGCTCCGGGCCGTCGTTGATTTGGAGAAGCT
CGGCGAACGGACGATCTGGATCGACTGTGACGTCATTCAAGCGGACGGCGGAACAAGAACGGCTTCCATTACCGGCGCCT
TCTTGGCAATGGCCATTGCGGCCGGCAAACTCGTAAAAAGCGGCGTTATCAAAACCTCTCCTGTGACAGACTATCTCGCG
GCCATTTCTGTCGGGATGGATAAAGAAGAAGGCCTTCTTTTGGATCTGAATTATGAAGAGGACTCAGCGGCTGAAGTCGA
TATGAATATCATCATGACGGGAAGCGGACGTTTTGTGGAGCTTCAAGGGACGGGCGAAGAAGCCACATTCTCCCGTGAAG
ATTTAAACGGACTGTTAAGCCTTGCCGAAAAAGGAATCCAGACGCTTATTCAAAAACAAAAAGAAGTGCTTGGAGATACA
TTGCCTGAACTGAAATAA

Protein sequence :
MRHDGRQHDELRPITFDLDFITHPEGSVLITAGNTKVICNASVEDRVPPFLRGGGKGWITAEYSMLPRATNQRTIRESSK
GKVSGRTMEIQRLIGRALRAVVDLEKLGERTIWIDCDVIQADGGTRTASITGAFLAMAIAAGKLVKSGVIKTSPVTDYLA
AISVGMDKEEGLLLDLNYEEDSAAEVDMNIIMTGSGRFVELQGTGEEATFSREDLNGLLSLAEKGIQTLIQKQKEVLGDT
LPELK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-57 58