Gene Information

Name : ykcC (BAMTA208_10690)
Accession : YP_005541796.1
Strain : Bacillus amyloliquefaciens TA208
Genome accession: NC_017188
Putative virulence/resistance : Virulence
Product : glycosyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2104467 - 2105438 bp
Length : 972 bp
Strand : -
Note : COG0463 Glycosyltransferases involved in cell wall biogenesis

DNA sequence :
ATGAGCAGACATATTCAATATTCAATTGTCGTCCCCGTTTATAATGAGGAACTCGTCATTCAGACAACCTATCAACGTTT
GAAAGAAGTCATGGATCAAACAAAAGATCATTATGAATTGATCTTTGTCAATGACGGAAGCAAAGACCGCAGTATTGAGA
TATTAAGAGAGCACAGTCTGATTGATCCGAGAGTGAAAATTATTGATTTTTCCAGAAACTTCGGTCACCAGATCGCAATC
ACCGCAGGCATGGATTACGCAGAGGGGAATGCCGTCATCGTCATTGACGCCGATTTGCAGGACCCTCCTGAATTAATCCT
TGATATGATTGAACAGTGGAAAGAAGGCTACGATGTGGTGTACGCCGTCAGAACGAAACGGAAAGGAGAAACCTTTTTCA
AGAAACAGACGGCTTCTATGTTTTATCGGCTGCTGCGGAGCGTGACCGATATTGATATTCCGCTCGATACCGGAGATTTC
CGCCTGCTGGACAGAAAAGTCTGTGACGAAATGAAAAGATTAAAAGAGAAAAATCCATTTGTCAGGGGACTCGTCAGCTG
GGTCGGGTTTAAGCAGACTGCTGTTGAATATGAACGCGATGAAAGGCTTGCGGGAGAAACGAAATACCCGCTTAAAAAAA
TGCTGAAGCTTTCCATGGACGGTATAACAACGTTCTCCCATAAACCGCTCAAGGCGGCAAGCTATGCGGGAATGATTATG
TCCGGAGCGGGTTTTCTTTATATGTTTGTCGTTTTATATATGAAACTTTTTACAGACAGCACCATTACAGGCTGGTCCTC
ACTGATTGTGATACAGCTTTTATTCAGCGGCATCGTTCTCTTAATTCTCGGTATGATCGGCGAATACATCGGAAGGATTT
ATGACGAAGCAAAAGACCGTCCGCTCTATATCGTGCAAAAAGCGTACGGCATTAAAAACGAAAAGGTTTATCGGGATCAG
CATATGTCTTAA

Protein sequence :
MSRHIQYSIVVPVYNEELVIQTTYQRLKEVMDQTKDHYELIFVNDGSKDRSIEILREHSLIDPRVKIIDFSRNFGHQIAI
TAGMDYAEGNAVIVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKRKGETFFKKQTASMFYRLLRSVTDIDIPLDTGDF
RLLDRKVCDEMKRLKEKNPFVRGLVSWVGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMIM
SGAGFLYMFVVLYMKLFTDSTITGWSSLIVIQLLFSGIVLLILGMIGEYIGRIYDEAKDRPLYIVQKAYGIKNEKVYRDQ
HMS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 7e-55 43
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 1e-53 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ykcC YP_005541796.1 glycosyltransferase VFG0670 Protein 2e-54 42