Gene Information

Name : rplS (BAMTA208_09130)
Accession : YP_005541486.1
Strain : Bacillus amyloliquefaciens TA208
Genome accession: NC_017188
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1804784 - 1805131 bp
Length : 348 bp
Strand : -
Note : COG0335 Ribosomal protein L19

DNA sequence :
ATGCAAAAACTAATTCAAGATATCACAAAAGAACAGCTTCGCACTGATCTTCCTGCGTTCCGTCCTGGTGACACTTTACG
TGTACACGTAAAAGTTGTTGAGGGTAACCGTGAGCGTATCCAGATCTTTGAAGGTGTTGTGATCAAGCGTCGTGGTGGTG
GAATCAGCGAAACGTTCACAGTTCGTAAGATTTCTTACGGTGTTGGCGTTGAACGTACATTCCCTGTACACACACCAAAA
ATCGCGAAAATCGAAGTTGTACGTTACGGTAAAGTACGTCGCGCTAAGCTTTACTACCTGCGTGAACTTCGCGGAAAAGC
GGCTCGTATTAAAGAAATCAGACGATAA

Protein sequence :
MQKLIQDITKEQLRTDLPAFRPGDTLRVHVKVVEGNRERIQIFEGVVIKRRGGGISETFTVRKISYGVGVERTFPVHTPK
IAKIEVVRYGKVRRAKLYYLRELRGKAARIKEIRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 4e-42 83
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 3e-26 59