Gene Information

Name : nrdE (BAMTA208_08445)
Accession : YP_005541353.1
Strain : Bacillus amyloliquefaciens TA208
Genome accession: NC_017188
Putative virulence/resistance : Unknown
Product : ribonucleotide-diphosphate reductase subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : 1.17.4.1
Position : 1613173 - 1615275 bp
Length : 2103 bp
Strand : -
Note : COG0209 Ribonucleotide reductase, alpha subunit

DNA sequence :
TTGTCACAAAACCAAGTGCCAAAATGGATTCAGTTAAATAACGAAATTATGATCCAACAAGATGGAAAATTCCAGTTTGA
TAAAGATAAAGAGGCTGTACATAGCTATTTTGTTGACTATATCAATCAAAACACGGTATTCTTTCACGATTTGAAAGAGA
AGCTGGATTATCTGATTGAAAATCAATATTACGAAGAAGAGTTTTTGAGCCTCTATTCGTTTGAAGAGATAAAAGATGTT
TTCAAGACAGCTTACGCGAAGAAATTTCGTTTTCCATCCTTCATGAGTGCTTTTAAATTTTATAACGATTATGCATTGAA
AACGAATGATAAGAAAAAAATCCTTGAGCGTTACGAGGACAGAATTTCAATCGTGGCCCTGTTTTTTGCAAACGGCGACG
CGGAAAAAGCGAAAGACTATGTGCGCTTAATGATTAACCAGGAATATCAGCCGAGCACGCCGACATTCTTAAATGCCGGA
CGCAAACGCCGCGGCGAGCTGGTCAGCTGTTTCCTTTTGGAAGTCAATGACTCGCTGAATGATATTTCAAGAGCGATCGA
CATCTCCATGCAGCTTTCGAAGCTCGGAGGAGGCGTGTCACTTAACCTGTCGAAGCTCCGTGCCAAAGGCGAAGCGATTA
AAGATGTGGAAAATGCCACAAAAGGCGTCGTAGGCGTGATGAAACTTCTTGATAATGCGTTCCGCTATGCTGACCAAATG
GGGCAAAGACAAGGCTCAGGCGCGGCATACCTGAACATTTTCCACCGGGATATTAATGATTTTCTTGATACGAAAAAAAT
CTCGGCTGATGAAGACGTCCGCGTTAAAACCCTTTCCATCGGCGTCGTGATTCCGGACAAGTTCGTCGAGCTTGCGAGAG
AGGATAAAGCCGCTTATGTCTTTTATCCGCATACGATTTATAAAGAATACGGCCAGCATATGGACGAAATGGACATGACG
GCGATGTATGAGGAGCTTGTCGACAATCCGCGCGTCAAAAAAGAAAAAGTGAATGCGCGCAAATTGCTTGAAAAGCTTGC
CGTTCTCCGCTCTGAGTCAGGCTATCCGTACATTATGTTCCAGGACAACGTAAATAAAGAGCACGCGAATAACCACGTCT
CAAAAGTGAAATTCTCAAACCTTTGCTCTGAAGTGCTTCAGGCGTCACAAGTTTCAGCTTACACAGATTATGACGAAGAA
GATGAAATCGGCCTGGACATTTCCTGCAACCTGGGTTCTTTAAATATTTTGAATGTCATGAAACATAAATCGATTGAGCG
CACGGTGAAACTTGCGACGGATTCCCTGACTCATGTGTCCGAGACGACGGATATCCGCAACGCGCCGGCAGTCAGACGCG
CGAACAAAGCGATGAAATCGATCGGTTTAGGCGCGATGAACCTGCACGGCTACCTTGCCCAAAACGGCATCGCTTATGAA
AGCCCGGAAGCAAGAGACTTCGCGAATACGTTCTTTATGATGGTAAACTTTTATTCCATCCAGCGTTCAGCTGAGCTTGC
GAAAGAAAAAGGCGAAACGTTTGAGCATTATGAAGGCTCCACTTATGCAACGGGAGAATATTTCAATAAATACATCGAGA
AAGAGTTCTCGCCGGCATACGAAAAAATCGCTGCGCTCTTTGAAGGCATGCACATTCCGACAATCGAAGACTGGAAAGAG
CTGAAGGCGTTTGTCGCTGAAAACGGCATGTACCACAGCTACAGACTGTGTATCGCGCCGACAGGCTCCATTTCCTACGT
CCAATCCAGCACGGCATCCGTTATGCCGATTATGGAACGGATCGAAGAAAGAACATACGGAAACTCAAAAACGTATTACC
CGATGCCGGGGTTAGCGTCTAATAACTGGTTCTTCTACAAAGAAGCTTATGATATGGACATGTTCAAAGTGGTGGATATG
ATCGCGACAATCCAGCAGCATATCGATCAGGGAATCAGCTTCACCCTGTTTTTGAAAGATACGATGACAACTCGTGATCT
GAACCGTATTGATCTGTATGCCCACCATAGAGGCATCAAAACCATTTACTATGCAAGAACGAAAGATACCGGGCAGGACA
GCTGTCTTTCTTGTGTTGTTTGA

Protein sequence :
MSQNQVPKWIQLNNEIMIQQDGKFQFDKDKEAVHSYFVDYINQNTVFFHDLKEKLDYLIENQYYEEEFLSLYSFEEIKDV
FKTAYAKKFRFPSFMSAFKFYNDYALKTNDKKKILERYEDRISIVALFFANGDAEKAKDYVRLMINQEYQPSTPTFLNAG
RKRRGELVSCFLLEVNDSLNDISRAIDISMQLSKLGGGVSLNLSKLRAKGEAIKDVENATKGVVGVMKLLDNAFRYADQM
GQRQGSGAAYLNIFHRDINDFLDTKKISADEDVRVKTLSIGVVIPDKFVELAREDKAAYVFYPHTIYKEYGQHMDEMDMT
AMYEELVDNPRVKKEKVNARKLLEKLAVLRSESGYPYIMFQDNVNKEHANNHVSKVKFSNLCSEVLQASQVSAYTDYDEE
DEIGLDISCNLGSLNILNVMKHKSIERTVKLATDSLTHVSETTDIRNAPAVRRANKAMKSIGLGAMNLHGYLAQNGIAYE
SPEARDFANTFFMMVNFYSIQRSAELAKEKGETFEHYEGSTYATGEYFNKYIEKEFSPAYEKIAALFEGMHIPTIEDWKE
LKAFVAENGMYHSYRLCIAPTGSISYVQSSTASVMPIMERIEERTYGNSKTYYPMPGLASNNWFFYKEAYDMDMFKVVDM
IATIQQHIDQGISFTLFLKDTMTTRDLNRIDLYAHHRGIKTIYYARTKDTGQDSCLSCVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 4e-159 47