Gene Information

Name : yvrH (BAMTA208_07970)
Accession : YP_005541260.1
Strain : Bacillus amyloliquefaciens TA208
Genome accession: NC_017188
Putative virulence/resistance : Resistance
Product : yvrH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1533018 - 1533725 bp
Length : 708 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGTCGCAGACTCAAAGCAAAGTATTAATAATAGATGACGAAAGAGAAATTTTGGAACTGATCAAAACCGTATTAATAAG
AGAAGGCATTGATCGCGTGATTACAGCTTCTACTGCCCGTGATGGATTGGCTCAATTTCATCAAGAAAATCCAGATCTGG
TTATATTGGATATCATGCTCCCAGACGGTGAAGGCTATGATATCTGTAAGCAAATAAGAGATATTTCACATGTTCCGATT
ATTTTTTTGTCTGCAAAAGGAGAGGAAACGGACAAAATTGTAGGACTTGCCATCGGTGGGGACGACTACATTACAAAACC
CTTCAGCCCTAAGGAAGTCGCATATCGGGTCAAAGCACAGCTAAGAAGATCTTCTTACTTACAGCCATCTCAAACCGACA
CCCTGATAAAAGCAGGGCCCTTTGAATTACATCAGCAGCAAGCCGAGCTCACCAAAAACGGAGCGGCTATTGAGTTAACA
CCTAAAGAACTCATGCTCATGACATATTTTTTGCAGCATCCCAATCGGGTGATCAGTAAAGAAACACTTTATCAAGCTGT
ATGGGGAGAAGATTTCTTCGGTTCTGACAATACGGTGATGGTTCATATACGCAGACTCCGGGAGAAAATAGAAACCATCC
CATCCACACCAGACTTTCTCGTCACTGTAAAAGGGTTAGGCTACAAATTTGTTGTAAAGGATGCTTAA

Protein sequence : 
MSQTQSKVLIIDDEREILELIKTVLIREGIDRVITASTARDGLAQFHQENPDLVILDIMLPDGEGYDICKQIRDISHVPI
IFLSAKGEETDKIVGLAIGGDDYITKPFSPKEVAYRVKAQLRRSSYLQPSQTDTLIKAGPFELHQQQAELTKNGAAIELT
PKELMLMTYFLQHPNRVISKETLYQAVWGEDFFGSDNTVMVHIRRLREKIETIPSTPDFLVTVKGLGYKFVVKDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboR YP_006309915.1 SboR Not tested FWisland_1 Protein 9e-37 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yvrH YP_005541260.1 yvrH DQ212986.1.gene4.p01 Protein 2e-36 46
yvrH YP_005541260.1 yvrH AF130997.1.orf0.gene Protein 2e-35 45
yvrH YP_005541260.1 yvrH AE016830.1.gene1681. Protein 2e-37 44
yvrH YP_005541260.1 yvrH FJ349556.1.orf0.gene Protein 1e-38 44
yvrH YP_005541260.1 yvrH NC_012469.1.7685629. Protein 5e-40 44
yvrH YP_005541260.1 yvrH AM180355.1.gene1830. Protein 5e-37 44
yvrH YP_005541260.1 yvrH AF155139.2.orf0.gene Protein 9e-38 43
yvrH YP_005541260.1 yvrH NC_002952.2859905.p0 Protein 2e-40 43
yvrH YP_005541260.1 yvrH NC_003923.1003749.p0 Protein 2e-40 43
yvrH YP_005541260.1 yvrH NC_002758.1121668.p0 Protein 2e-40 43
yvrH YP_005541260.1 yvrH NC_007622.3794472.p0 Protein 2e-40 43
yvrH YP_005541260.1 yvrH NC_009641.5332272.p0 Protein 2e-40 43
yvrH YP_005541260.1 yvrH NC_013450.8614421.p0 Protein 2e-40 43
yvrH YP_005541260.1 yvrH NC_007793.3914279.p0 Protein 2e-40 43
yvrH YP_005541260.1 yvrH NC_002745.1124361.p0 Protein 2e-40 43
yvrH YP_005541260.1 yvrH NC_009782.5559369.p0 Protein 2e-40 43
yvrH YP_005541260.1 yvrH NC_002951.3237708.p0 Protein 2e-40 43
yvrH YP_005541260.1 yvrH AF162694.1.orf4.gene Protein 2e-33 43
yvrH YP_005541260.1 yvrH AF253562.2.orf0.gene Protein 2e-27 43
yvrH YP_005541260.1 yvrH EU250284.1.orf4.gene Protein 3e-34 43
yvrH YP_005541260.1 yvrH NC_014475.1.orf0.gen Protein 7e-34 42
yvrH YP_005541260.1 yvrH NC_005054.2598277.p0 Protein 7e-34 42
yvrH YP_005541260.1 yvrH NC_012469.1.7686381. Protein 4e-34 41