Gene Information

Name : BAMTA208_06015 (BAMTA208_06015)
Accession : YP_005540873.1
Strain : Bacillus amyloliquefaciens TA208
Genome accession: NC_017188
Putative virulence/resistance : Virulence
Product : Phage holin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1190978 - 1191229 bp
Length : 252 bp
Strand : -
Note : COG5546 Small integral membrane protein

DNA sequence :
ATGACTAAAATTAACTGGAAAGTAAGACTAAAAAAGAAAACATTCCTGGTTGCAATCTTCTCTGCAACTCTTTTGTTTGC
ACAAGCAATTGCATCTGCTTTTGGATACGACATTTCTGTGTTTAGCGATGATCTTACTGAGAAATTTAATGCTTTACTTA
CGTTTTTAACTGCAATGGGGGTTGTAGTGGATCCAACCACTACAGGTATCTCAGACAGCGATCAAGCAATGGAATACACG
GAACCAAAATAA

Protein sequence :
MTKINWKVRLKKKTFLVAIFSATLLFAQAIASAFGYDISVFSDDLTEKFNALLTFLTAMGVVVDPTTTGISDSDQAMEYT
EPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV1946 NP_372470.1 holin-like protein Not tested ¥ÕSa3 Protein 7e-20 60
SA1760 NP_375055.1 hypothetical protein Not tested ¥ÕSa3 Protein 7e-20 60
SAUSA300_1924 YP_494575.1 holin Virulence ¥ÕSa3 Protein 7e-20 60
SAUSA300_1924 YP_494575.1 holin Virulence ¥ÕSa3 Protein 7e-20 60
SAKOR_01925 YP_008492113.1 Holin Virulence ¥ÕSa3 Protein 7e-20 60
MW1887 NP_646704.1 hypothetical protein Not tested ¥ÕSa3 Protein 7e-20 60
SAOV_1911 YP_005737356.1 phage-associated holin Not tested ¥ÕSa3 Protein 2e-15 59
SEQ_2040 YP_002747255.1 phage holin Not tested ¥ÕSeq4 Protein 2e-04 43