Gene Information

Name : pdxS (BAMTA208_00050)
Accession : YP_005539695.1
Strain : Bacillus amyloliquefaciens TA208
Genome accession: NC_017188
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 14217 - 15101 bp
Length : 885 bp
Strand : +
Note : COG0214 Pyridoxine biosynthesis enzyme

DNA sequence :
ATGGCTCAAACAGGTACTGACCGTGTAAAACGCGGAATGGCGGAAATGCAAAAAGGCGGCGTCATCATGGACGTTGTAAA
TGCTGAACAAGCGAAGATTGCCGAAGAGGCGGGAGCTGTTGCCGTAATGGCGTTAGAACGTGTTCCGGCTGATATTCGCG
CTGCCGGCGGTGTTGCCCGCATGGCTGACCCGACGATCGTTGAAGAAGTAATGAATGCTGTATCCATTCCCGTAATGGCA
AAAGCGCGTATCGGACATATCGTTGAAGCGCGTGTCCTTGAAGCAATGGGAGTAGATTATATCGATGAAAGTGAAGTCCT
GACTCCTGCTGACGAAGAATTTCATTTAAATAAAAATGAATATACTGTTCCGTTCGTATGTGGATGCCGTGATCTTGGCG
AAGCAACGCGCCGTATCGCTGAAGGAGCGTCCATGCTTCGTACAAAAGGCGAACCGGGAACAGGAAACATTGTGGAAGCT
GTCCGCCATATGAGAAAAGTAAACGCGCAAGTGCGCAAAGTTGTGGCGATGAGCAATGATGAGCTGATGACTGAAGCTAA
AAACCTCGGTGCTCCTTATGAACTGCTTCTTCAAATTAAGCGTGACGGCAAATTGCCTGTTGTCAACTTTGCTGCCGGCG
GAGTGGCGACGCCTGCTGATGCGGCATTGATGATGCAGCTTGGCGCTGATGGCGTATTTGTCGGTTCAGGTATTTTCAAA
TCGGACAATCCTGCTAAATTCGCTAAAGCAATTGTTGAAGCAACGACTCACTACACAGATTACAAACTGATTGCTGAGCT
TTCTAAAGAATTGGGCACAGCAATGAAAGGAATCGAAATCTCAAATCTATTGCCGGAACAGCGTATGCAAGAACGCGGCT
GGTAA

Protein sequence :
MAQTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMA
KARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEA
VRHMRKVNAQVRKVVAMSNDELMTEAKNLGAPYELLLQIKRDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFK
SDNPAKFAKAIVEATTHYTDYKLIAELSKELGTAMKGIEISNLLPEQRMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-83 64
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-82 63
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-82 63