Gene Information

Name : ABED_0658 (ABED_0658)
Accession : YP_005538185.1
Strain : Arcobacter butzleri ED-1
Genome accession: NC_017187
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 684726 - 685430 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAAATAGAAAAGTTATCATAGAGTTTAAAAAGATTGTAAAAACCTATGGTTCTGGTGATACTCAAACTCACGCTTT
AAATGGAGTAGATTTAAAAATATATGAAGGTGAATTTGTAGCAATAATGGGAGCTAGTGGAAGTGGAAAATCAACTTCTA
TGAATATGATAGGATGCTTAGATAAACCAACTAGCGGAGAGTATCTGTTTAATGGAATAAATGTAGAAAAACTAAATAGA
AATCAAATGGCTTTGTTAAGAAGAAATTATTTAGGTTTTGTTTTTCAAGGATTCAATCTTTTAGGAAGAACTTCTGCTTT
AGAAAATGTTGAACTTCCTTTAATTTACAGAAAAATTCCAGCAAAACAAAGAGAAATTTTAGCTACTGAAGCTTTAGATA
AAGTAGGATTAAGAAGTGTTATAAAAAATACTCCAGCTGAGCTTTCAGGTGGTCAACAACAACGTGTTGCAATAGCAAGA
GCAATAGTGACAAATCCTTTAGTTTTACTTGCGGATGAACCAACAGGAAATCTTGATAGTATAAAAAGTGTAGAGATTAT
GAATTTATTAAAGCAATTAAATAAAGAGTCTAATATTACGGTTATTATGGTAACTCACGAAGAAGAAATGGCTGCTTATG
CAGATAGAATAATATATTTTAGAGATGGACATATAGAAGATAGTTTAAAAAAAGGATATAAATAA

Protein sequence : 
MENRKVIIEFKKIVKTYGSGDTQTHALNGVDLKIYEGEFVAIMGASGSGKSTSMNMIGCLDKPTSGEYLFNGINVEKLNR
NQMALLRRNYLGFVFQGFNLLGRTSALENVELPLIYRKIPAKQREILATEALDKVGLRSVIKNTPAELSGGQQQRVAIAR
AIVTNPLVLLADEPTGNLDSIKSVEIMNLLKQLNKESNITVIMVTHEEEMAAYADRIIYFRDGHIEDSLKKGYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-31 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 8e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABED_0658 YP_005538185.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-51 55
ABED_0658 YP_005538185.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-40 46
ABED_0658 YP_005538185.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-36 44
ABED_0658 YP_005538185.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-35 43
ABED_0658 YP_005538185.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABED_0658 YP_005538185.1 ABC transporter ATP-binding protein VFG0869 Protein 7e-20 41