Gene Information

Name : ABED_0474 (ABED_0474)
Accession : YP_005538001.1
Strain : Arcobacter butzleri ED-1
Genome accession: NC_017187
Putative virulence/resistance : Resistance
Product : sodium-solute symporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 486397 - 488064 bp
Length : 1668 bp
Strand : -
Note : -

DNA sequence :
ATGTTAAAGATTTTAGTACTAATTTCTATCTTTGCAATATCGCTTTTTGCAGCTGGTGATGCAACTTTTGAGGGGAAAAG
AGATTTAAATATTCCTGCAATTATTATGTTTTTTATATTTATTGCTGGAACTTTAGGAATTACTTATTGGGCAGCAAGAA
AAACTAAATCTGCTTCAGATTTTTATACAGCTGGTGGAGGAATAAGTGGTTTCCAAAATGGTTTAGCAATTGCAGGTGAT
TATATGTCTGCTGCTGCATTTTTAGGAGTATCTGGACTTATTTATATGAGTGGATATGATGGTGTTATTTATGCTGTTTC
GTTTTTAGTTGGTTGGCCTGTAATTTTATTTTTTATGGCTGAAAAATTAAGAAATTTAGGTAAATTTACTTTTGCAGATA
TCGCTGCTTATAGATTAGGTCAAAAAGAGATAAGAACTTTAGCGGCATTTGGTTCACTTTCTGTTGTTGTTTTATACTTA
ATCGCACAAATGGTAGGAGCAGGTAAACTTATCCAAATTTTATTTGGAATGGAATATGAATATGCTGTATTTATGGTTGG
AGCATTGATGATTATTTATGTAACATTTGGTGGAATGCTTGCAACTACTTGGGTACAAATTATCAAAGCTATTTTATTAT
TATCTGGTGTTTCGTTTATGGCCGTTATGATTTTATATCACTTCGACTTCTCTTTTGAGTCTTTAGCTGTTCAAGCTGTT
GAACATCATAAGAATGGTGAAGCTATTTTAAAACCAGGTGGATTTTTATCAGACCCAATTTCAGCAATTTCTTTAGGTAT
GGCTTTAATGCTTGGAACTGCTGGTCTTCCTCACGTTTTAATGAGATTTTTTACAGTTGGAAATGCAAAAGAAGCTAGAA
AATCTGTTGTTTATGCAACTGGATTTGTAGCATATTTTTGGATTATTATTACTATTGTTGGATTTGGAGCAATTGCTTTT
TTAAATACAGCAGAAGGTGCTCAATATTTTGACGGAGCAAAAGCATATCTTGATGGTGGGAAATTATTTGGTGGAAGTAA
TATGGCTTCTGTTCACTTATCACATATGTTAGGTGGAAATGCTTTCTTAGGATTTATCTCTGCTGTTGCATTTGCTACTA
TTTTAGCGGTTGTTTCAGGTTTGACACTTGCAGGAGCAAGTGCTATTTCACATGATATTTATGCAAATGTTATAAATCCT
AATGCAACAGATGAACAAGTTGTAAAAATATCTAAAATCACAGTTATTATTGTGGGAATTGTTGGTGTTACTTTAGGTAT
CGCATTTGAATCACAAAATATTGCATATATGGTTGGTCTTGCTTTTGGTATTGCAGCAAGTGCTAATTTCCCTATTTTAT
TTTTATCAATTTATTGGAGTCAATTAACTACAAGAGGCGCATTTATTGGTGGATTTATGGGATTAATTACTGCTGTTGTA
CTTGTAATTTTGGGACCAAATGTTTGGGTTCAAATTTTAGGAAATGAAAAAGCAATATTTCCTTATGCACACCCTGCACT
ATTTTCTGTAACAGTAGCATTTGTTTCTATTTGGTTCTTCTCTAAAATTGATAACTCTGAAAAAGCTATAAAAGAAAGAG
CTTTATTTAGAGGTCAAAATATTAGAGCTAATACAGGTATTGGTGCGGCAGGAGCTGTTTCACACTAA

Protein sequence :
MLKILVLISIFAISLFAAGDATFEGKRDLNIPAIIMFFIFIAGTLGITYWAARKTKSASDFYTAGGGISGFQNGLAIAGD
YMSAAAFLGVSGLIYMSGYDGVIYAVSFLVGWPVILFFMAEKLRNLGKFTFADIAAYRLGQKEIRTLAAFGSLSVVVLYL
IAQMVGAGKLIQILFGMEYEYAVFMVGALMIIYVTFGGMLATTWVQIIKAILLLSGVSFMAVMILYHFDFSFESLAVQAV
EHHKNGEAILKPGGFLSDPISAISLGMALMLGTAGLPHVLMRFFTVGNAKEARKSVVYATGFVAYFWIIITIVGFGAIAF
LNTAEGAQYFDGAKAYLDGGKLFGGSNMASVHLSHMLGGNAFLGFISAVAFATILAVVSGLTLAGASAISHDIYANVINP
NATDEQVVKISKITVIIVGIVGVTLGIAFESQNIAYMVGLAFGIAASANFPILFLSIYWSQLTTRGAFIGGFMGLITAVV
LVILGPNVWVQILGNEKAIFPYAHPALFSVTVAFVSIWFFSKIDNSEKAIKERALFRGQNIRANTGIGAAGAVSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 6e-127 57
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 5e-64 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABED_0474 YP_005538001.1 sodium-solute symporter BAC0564 Protein 1e-147 66
ABED_0474 YP_005538001.1 sodium-solute symporter BAC0570 Protein 4e-133 59