Gene Information

Name : ABED_0353 (ABED_0353)
Accession : YP_005537880.1
Strain : Arcobacter butzleri ED-1
Genome accession: NC_017187
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 357132 - 358628 bp
Length : 1497 bp
Strand : +
Note : -

DNA sequence : 
ATGATTTATGCAAGACCAACGTACAAAACGCAATATGAAAACTTTATCGGTGGAGAGTGGATCGCTCCTGTTAGTGGTGA
ATATTTTGATAATATTTCTCCTGTTGATGGAAAACTTCTTACTAAAATTCCTAGATCAAATGAAAAAGATGTTGAATTAG
CAATACAAGCTGCTAAAAAGGCATTTGAATCTTATAAACATACATCAGTTGTACAAAGAAGTACAATGTTAAACAAAGTA
GCAGATTTAATTGAAAAAAATTTAGAAATGTTAGCTATTGCTGAAACATTAGATAACGGAAAAGCAGTTAGAGAAACTTT
AAATGCTGATATTCCTTTAGTTGTTGACCACTTTAGATATTTTGCTTCTGTTATAAGAGCAGAATCTGGAACAGTTTCTG
ACTTAGATGAAAATACAATTTCTCAAGAAATTTATGAGCCATATGGTGTTGTAGCTCAAATTATTCCTTGGAATTTCCCG
CTTTTGATGGCTGCTTGGAAATTAGCTCCTGCATTAGCTGCTGGAAATTGTGTGGTTTTAAAACCTGCGAGTGCAACTCC
AATGTCAATTTTACTTTTAATGGAAATTATTCAAGAAGCTTTACCAAAAGGTGTAATAAATATTATTAATGGAGCAGGTG
GAAAAATAGGTAAATATTTAGCTACTCATCCTGATATTAAAAAAGTTGCATTTACAGGTGAAACAACAACTGGACAATTA
ATTATGCAATATGCAACAGAAAATATTATTCCTTCAACTTTAGAACTTGGTGGAAAATCACCAAATGTATTCTTTGAATC
AATTATGGATGAAGATGATGAATTCTTTGATAAAGCAATAGAAGGTTTAGTATTATTTGCATTTAATTCTGGTGAAGTGT
GCACTTGCCCTTCAAGAGCATTAATTCAAGAATCAATATATGAACCATTTATGAAAAGAGTTTTAGAGCGAGTAAAAGCT
ATTAAGCTTGGAAATCCACTTGATACAGAGTGCATGATGGGTGCTCAATGCTCTTTAAATCAAAAAGAGAAAATCTTAAG
TTATTTAAAAGTTGGAAAAGAAGAAGGTGCTGAGCTATTAGTTGGTGGAGATGTATATAATTCTTCTGTTAATCCAGATG
GTTTCTATATTCAACCGACTTTATTTAAAGGTCATAATAAAATGAGAATTTTCCAAGAAGAGATTTTTGGACCAGTTCTT
GCAGTTACAACTTTTAAAGATGAAAAAGAAGCTTTAGAAATAGCAAATGATACAATCTACGGTTTAGGTTCTGGTGTTTG
GTCTAGAGATGCACATCAACTTCATAGAATGAGTAGAGGAATACAAGCAGGAAGAGTTTGGGTAAATTGTTATCATATGT
ATCCTTCTCATGCTTCATTTGGTGGATATAAAAAATCTGGAATTGGAAGAGAAACTCATATGATAATGTTAAATAATTAT
AGACATACAAAAAATATTTTAACTTCATATAGTCCAAATGCTTTAGGATTTTTCTAA

Protein sequence : 
MIYARPTYKTQYENFIGGEWIAPVSGEYFDNISPVDGKLLTKIPRSNEKDVELAIQAAKKAFESYKHTSVVQRSTMLNKV
ADLIEKNLEMLAIAETLDNGKAVRETLNADIPLVVDHFRYFASVIRAESGTVSDLDENTISQEIYEPYGVVAQIIPWNFP
LLMAAWKLAPALAAGNCVVLKPASATPMSILLLMEIIQEALPKGVINIINGAGGKIGKYLATHPDIKKVAFTGETTTGQL
IMQYATENIIPSTLELGGKSPNVFFESIMDEDDEFFDKAIEGLVLFAFNSGEVCTCPSRALIQESIYEPFMKRVLERVKA
IKLGNPLDTECMMGAQCSLNQKEKILSYLKVGKEEGAELLVGGDVYNSSVNPDGFYIQPTLFKGHNKMRIFQEEIFGPVL
AVTTFKDEKEALEIANDTIYGLGSGVWSRDAHQLHRMSRGIQAGRVWVNCYHMYPSHASFGGYKKSGIGRETHMIMLNNY
RHTKNILTSYSPNALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-125 61
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-132 59
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-132 59
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-132 59
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-131 59
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 9e-79 58
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 9e-79 58
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 3e-78 58
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 3e-78 58
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 2e-78 58
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 9e-79 58
aldA ACK75580.1 aldehyde dehydrogenase Not tested VPI Protein 9e-78 57
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 2e-78 57
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 3e-78 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABED_0353 YP_005537880.1 aldehyde dehydrogenase VFG0082 Protein 7e-126 61