Gene Information

Name : ABED_1740 (ABED_1740)
Accession : YP_005539267.1
Strain : Arcobacter butzleri ED-1
Genome accession: NC_017187
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1814439 - 1815689 bp
Length : 1251 bp
Strand : -
Note : -

DNA sequence : 
ATGATAATTCCTATTTGCATATTTTTAGTAACTTTATTTCTAATCATTACTCAACCAAAAGGTTTACAAATAGGAACAAC
AGCTATTTTAGGTGCAATTATTGCTTTAATTTTAGGTGTAGTAAGTATCAATGATGTTTTAGATGTAACAAACATAGTTT
GGGATGCAACTTTAGCTTTTATTGGAATCATTATTTTATCTTTAGTTTTAGATGAAATTGGCTTTTTTGAGTGGTGCGCT
TTAAAAATGGCAAAATTTTCAAAAGGAAGTGGAATAAGAATGTTTATCTATTCTATTTTATTGGGAAGTTTTGTTTCAGC
ACTTTTTGCAAATGATGGGGCAGCTCTTATATTAACACCTATTTTATTAGCAAAAATGAGAGTTTTACAATTAAGTACAA
AAACAATAATTGCTTTTTTACTTGCTGGAGGTTTTATAAGTGATAGTGCTTCTTTACCTTTTGTATTTTCAAATCTTACA
AATATAGTAACTGCAAACTATTTTAATATAGGTTTTGTGGATTATTTTTTTAATATGATTATTCCTTTTATTGTGAGTGT
TATTGCTTCGATAGTTTTTTTGTGGTTAATTTTGAGAAAAGATATTCCAAAAAAAGTTGATATTAGACTTTTAAAAGAAC
CAAAAAGTGTTATAAAAAATATGAAGCTTTTTTATTTTTCTTGGTTTTTTCTAGCCTTTTTGTTGAGTGCTTATGCTTTG
GGAGATATTTATAAACTTCCTATCTCTTTTTTTGCATTAGGTGGTGCGTTAGTTCTTTTAATAATTGCAAGTTTAACAAA
AAGTGTAAATGCAAAAAATATTATAAAAGAAGCTCCTTGGCAAATCGTTTGGTTTAGTATTGGTCTTTATATTGTTGTTT
ATGGTTTAAAAAATGCAGGATTAACTGAATATTTAACAACAATACTAAATTATTTAGTTTTACAAGGTGATACGATAGCT
ATTATATCAACAGGGTTTATAAGTGCAATTTTAAGTGCAGTTATGAATAATCTTCCAACAATTATGATTATGGATATAGC
ACTAAAAGATATACCAAATGAGGCTTTAGCTTATGCAAATATTATTGGATGTAATTTAGGTCCAAAAATGACACCATTTG
GAAGTTTAGCGACTCTTCTTTGGCTTCATGTTTTAGCAAAAAAAGGTATAAAAATAAGCTTTTGGGAATATAGCAAATTT
GGTTTGATTATTACACCACCTGTTTTACTATTTGTTCTTTTAGCAGTTTAA

Protein sequence : 
MIIPICIFLVTLFLIITQPKGLQIGTTAILGAIIALILGVVSINDVLDVTNIVWDATLAFIGIIILSLVLDEIGFFEWCA
LKMAKFSKGSGIRMFIYSILLGSFVSALFANDGAALILTPILLAKMRVLQLSTKTIIAFLLAGGFISDSASLPFVFSNLT
NIVTANYFNIGFVDYFFNMIIPFIVSVIASIVFLWLILRKDIPKKVDIRLLKEPKSVIKNMKLFYFSWFFLAFLLSAYAL
GDIYKLPISFFALGGALVLLIIASLTKSVNAKNIIKEAPWQIVWFSIGLYIVVYGLKNAGLTEYLTTILNYLVLQGDTIA
IISTGFISAILSAVMNNLPTIMIMDIALKDIPNEALAYANIIGCNLGPKMTPFGSLATLLWLHVLAKKGIKISFWEYSKF
GLIITPPVLLFVLLAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-84 55
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-85 55
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 9e-88 55
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 3e-70 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABED_1740 YP_005539267.1 arsenical pump membrane protein BAC0574 Protein 5e-86 55
ABED_1740 YP_005539267.1 arsenical pump membrane protein BAC0575 Protein 2e-86 55
ABED_1740 YP_005539267.1 arsenical pump membrane protein BAC0578 Protein 7e-72 49
ABED_1740 YP_005539267.1 arsenical pump membrane protein BAC0576 Protein 8e-72 49
ABED_1740 YP_005539267.1 arsenical pump membrane protein BAC0031 Protein 2e-72 49
ABED_1740 YP_005539267.1 arsenical pump membrane protein BAC0577 Protein 2e-70 48