Gene Information

Name : ABED_1379 (ABED_1379)
Accession : YP_005538906.1
Strain : Arcobacter butzleri ED-1
Genome accession: NC_017187
Putative virulence/resistance : Resistance
Product : beta-lactamase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1416170 - 1416931 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence :
ATGAATAAAAAAATAAAACTAATTTTTATTTTAATTTTTTCAATAAATTTATTTGCAAATGATGTGGAACTTGAAAATTT
ATTTAAAAAATACCAAGTTGAAGGAACTTTAGTATTAGAGTCTTTAAATACAAAAAAAGTAGATATTTATAATGAAAAGA
GAGCAAATACATCGTTTTCTCCTGCTTCAACATTTAAAATACCAAATACTTTGATAGCTTTAAATGAAGGTGTTGTAAAT
AAAGATTCTATAATAGTTTGGGATAAAAAAGTAAGGGAGTTTGATGCTTGGAATAAAGACCAAACTTTACAATCAGCTTT
CAAAAGTTCTTGTGTTTGGTGTTATAAAGAGTTCGCTTCAAAAATTGGAGTTGAAAAATATAAAAAGTATCTAAAAGAGC
TTAATTATGGGAATAAAACAATAGGCAAAGATGTAACTGATTTTTGGTTGGATGAGAGTTTGAGAATTACGGCTTTTGAA
GAAATAAGATTTTTAAAACAATTACAAGCAAACAATTTAGCTTTTAAACAAGAAGATATAAATCTTCTAAAAGAGTTGAT
GATTGATGAAAAAAGCGAAAATTATGTAGTTAGAGCAAAAACAGGTTGGGAAGGAAAATATGGTTGGTATGTTGGTTACG
TTGAAACAAACAATGATGTTTGGTTTTTTACTTTAAATATCGACACAAAAACAAAAGAAGATTTAGCAAAAAGAAAAGCT
TTAACTTTAGAAGCTTTAAAAATAAAAGGGATTATAGATTGA

Protein sequence :
MNKKIKLIFILIFSINLFANDVELENLFKKYQVEGTLVLESLNTKKVDIYNEKRANTSFSPASTFKIPNTLIALNEGVVN
KDSIIVWDKKVREFDAWNKDQTLQSAFKSSCVWCYKEFASKIGVEKYKKYLKELNYGNKTIGKDVTDFWLDESLRITAFE
EIRFLKQLQANNLAFKQEDINLLKELMIDEKSENYVVRAKTGWEGKYGWYVGYVETNNDVWFFTLNIDTKTKEDLAKRKA
LTLEALKIKGIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ACICU_00226 YP_001844885.1 Beta-lactamase class D Not tested AbaR20 Protein 6e-33 45
blaOXA-2 YP_005176242.1 beta-lactamase OXA-2 protein Not tested ICEPmu1 Protein 5e-32 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABED_1379 YP_005538906.1 beta-lactamase AF024602.1.gene3.p01 Protein 3e-33 45
ABED_1379 YP_005538906.1 beta-lactamase AF300985.1.gene1.p01 Protein 1e-31 44
ABED_1379 YP_005538906.1 beta-lactamase U63835.1.gene1.p01 Protein 2e-32 44
ABED_1379 YP_005538906.1 beta-lactamase JF795487.1.gene1.p01 Protein 4e-31 44
ABED_1379 YP_005538906.1 beta-lactamase EF552405.1.gene1.p01 Protein 3e-32 44
ABED_1379 YP_005538906.1 beta-lactamase M95287.gene.p01 Protein 2e-32 44
ABED_1379 YP_005538906.1 beta-lactamase AY289608.1.gene2.p01 Protein 3e-32 44
ABED_1379 YP_005538906.1 beta-lactamase AF350424.1.gene1.p01 Protein 4e-29 43
ABED_1379 YP_005538906.1 beta-lactamase HM015773.1.gene6.p01 Protein 4e-33 43
ABED_1379 YP_005538906.1 beta-lactamase JN205800.1.gene6.p01 Protein 7e-33 43
ABED_1379 YP_005538906.1 beta-lactamase HQ700343.1.gene1.p01 Protein 9e-35 43
ABED_1379 YP_005538906.1 beta-lactamase AF317511.1.gene5.p01 Protein 4e-33 43
ABED_1379 YP_005538906.1 beta-lactamase AF315351.1.gene2.p01 Protein 5e-32 43
ABED_1379 YP_005538906.1 beta-lactamase GQ202693.1.gene2.p01 Protein 3e-32 43
ABED_1379 YP_005538906.1 beta-lactamase Y10693.2.gene1.p2 Protein 5e-32 43
ABED_1379 YP_005538906.1 beta-lactamase DQ522237.1.gene5.p01 Protein 5e-32 43
ABED_1379 YP_005538906.1 beta-lactamase L07945.1.gene1.p01 Protein 3e-32 43
ABED_1379 YP_005538906.1 beta-lactamase AY500137.1.gene1.p01 Protein 2e-32 42
ABED_1379 YP_005538906.1 beta-lactamase AY139598.1.gene3.p01 Protein 1e-31 42
ABED_1379 YP_005538906.1 beta-lactamase JF800667.1.gene2.p01 Protein 2e-31 42
ABED_1379 YP_005538906.1 beta-lactamase AF371964.1.gene1.p1 Protein 1e-31 42