Gene Information

Name : ABED_0116 (ABED_0116)
Accession : YP_005537643.1
Strain : Arcobacter butzleri ED-1
Genome accession: NC_017187
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 123220 - 124572 bp
Length : 1353 bp
Strand : -
Note : -

DNA sequence :
ATGAGAACTTGGTTAGACAATCATAAAAACGACAAAATTAGAACTCAAATGTATTATGCAAAACAAGGAATTATTACTCC
TGATATGGAATATGTAGCGAAAGTTGAAAAACTTGATCCTGAGCTTGTAAGAGCTGAGATTGAAAGAGGAAGATTAATAA
TTCCAGCAAATGTAAATCATAAACATTTAGTTCCAATGTCGATTGGAATTGCATCTTCATGCAAAATAAATGCAAACATT
GGTTCATCAGCACTTGCTAGTGATGTTTCAAAAGAGATTGAAAAAGTTGATGTTTGTTTAAAATATGGTGCTGATACTAT
CATGGATTTAAGTACTGGTGGTGACTTAGATATGATAAGACGTGCGGTAATTGAACACTCTACTGTTCCAATTGGAACAG
TTCCTATTTATCAAATTTTACATGATGTAAAAGATAAAATTGAAGATTTAACAATCGAAAAAATGCTTGAAGTTATAGAA
AAACAAGCTCAACAAGGTGTTTCATATTTTACAATTCATGCTGGATTCTTACTTGAATTTATGCCTCATGTTGCAAAAAG
AAAAATGGGAATTGTAAGTCGAGGTGGTTCATTAATGGCTGCTTGGATGATGCATTATCATAGAGAAAATCCATTCTATG
AAGCTTTTGATGAGATTTTAAATATTTGTAGAAAATATGATGTTTCTTTATCATTAGGAGATAGTTTAAGACCTGGTTGT
TTAGCAGATGCTAGTGATGAAGCACAATTAAGAGAGTTAAAAGTTCTTGGAGAACTTACTTTAAGAGCTTGGGAAAAAGA
TGTTCAAGTTATGATTGAAGGTCCTGGACACGTTCCTCTAAATCAAATTGAAAGAAATATGAAACTTGAAAAAGAGTATT
GCCATGAAGCACCATTTTATATTTTAGGACCACTTACAACTGATATTGCTGCTGGATATGATCATATAAGTTCAGCAATT
GGTGCAGCTGTTGGTGGATGGCATGGCGCATCAATGTTATGTTATGTAACTCCAAAAGAGCACTTAGGTTTACCAAATGC
CGAAGATGTTAGAAATGGAATTATTGCATATAAAATTGCTGCTCACTCTGCTGACATAGCAAGAGGAAGAAAAGGTGCAA
GAGATATTGATGATGAAATGAGTGATGCTAGATATGCATTTAACTGGAATAAACAGTTTGAACTTTGTTTAGACCCAGAT
AGAGCAAAAGAGTATCACGATGAAACACTTCCTCAAGATGTATTTAAAGAAGCAGAATTCTGCTCAATGTGCGGACCAAA
GTTTTGCTCATACAAAATAACGCAAAAGATAGTAAAAGAACATGGTCAAGAAATGGTTAATATTGCAGGTTAA

Protein sequence :
MRTWLDNHKNDKIRTQMYYAKQGIITPDMEYVAKVEKLDPELVRAEIERGRLIIPANVNHKHLVPMSIGIASSCKINANI
GSSALASDVSKEIEKVDVCLKYGADTIMDLSTGGDLDMIRRAVIEHSTVPIGTVPIYQILHDVKDKIEDLTIEKMLEVIE
KQAQQGVSYFTIHAGFLLEFMPHVAKRKMGIVSRGGSLMAAWMMHYHRENPFYEAFDEILNICRKYDVSLSLGDSLRPGC
LADASDEAQLRELKVLGELTLRAWEKDVQVMIEGPGHVPLNQIERNMKLEKEYCHEAPFYILGPLTTDIAAGYDHISSAI
GAAVGGWHGASMLCYVTPKEHLGLPNAEDVRNGIIAYKIAAHSADIARGRKGARDIDDEMSDARYAFNWNKQFELCLDPD
RAKEYHDETLPQDVFKEAEFCSMCGPKFCSYKITQKIVKEHGQEMVNIAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 7e-120 58
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 7e-120 58
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 2e-115 56