Gene Information

Name : RAM_46935 (RAM_46935)
Accession : YP_005537309.1
Strain : Amycolatopsis mediterranei S699
Genome accession: NC_017186
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 9998864 - 9999577 bp
Length : 714 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
GTGCGCAAGGAATACGGCGACGGTGTGGTCGCGCTGGACGGGGTCTCGATCGCGTTCCCGCGCGGCGGGTTCACCGCGGT
GATGGGCCCGTCGGGCTCGGGCAAGAGCACGTTCCTGCACTGCGCGGCCGGCCTCGACCGGCCCACGTCCGGCCGGGTCG
TGCTCGACGGCCAGGACCTCGACGGCAAGAACGAGACCTACCTGACGAAGCTGCGGCGCGACCGCGTCGGCTTCGTCTTC
CAGGCGTTCAACCTGCTCCCGGCGCTGACGGTCGAGCAGAACGTCGTGCTGCCGCTGCAGCTGGCCGGCAAGCGCGCGGA
CAAGCGGCTGGTGGAACGGATCCTCGCGCACGTCGGGCTCGACGGACGCCGCAAGCATCTGCCCGGGCAGCTCTCCGGCG
GCCAGCAGCAGCGCGTCGCGATCGCCCGCGCCCTGGTCACGAGCCCCGCGGTGCTCTTCGCCGACGAGCCGACCGGCGCG
CTCGACACCCGGACGGCGTCCGAGGTGCTCGGCCTGCTGCGCGACTCCGTCCGGTCGTCGGGCCAGACGGTGATCATGGT
GACGCACGACCCGGTCGCCGCGTCCTACGCCGACGACGTCGTGTTCCTGGCCGACGGCCGGATCGCCGGGCGGCTGGCCC
GGCCGACCGCCGAAGCCGTCGCCGAGCGGATGACCCACCTGGGGGCCTGGGAGCGGCTGGCGGTGCGGGCCTGA

Protein sequence : 
MRKEYGDGVVALDGVSIAFPRGGFTAVMGPSGSGKSTFLHCAAGLDRPTSGRVVLDGQDLDGKNETYLTKLRRDRVGFVF
QAFNLLPALTVEQNVVLPLQLAGKRADKRLVERILAHVGLDGRRKHLPGQLSGGQQQRVAIARALVTSPAVLFADEPTGA
LDTRTASEVLGLLRDSVRSSGQTVIMVTHDPVAASYADDVVFLADGRIAGRLARPTAEAVAERMTHLGAWERLAVRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-41 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-41 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-41 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-29 45
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-14 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RAM_46935 YP_005537309.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 1e-41 50
RAM_46935 YP_005537309.1 peptide ABC transporter ATPase CP001581.1.gene798.p Protein 1e-45 48
RAM_46935 YP_005537309.1 peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-34 48
RAM_46935 YP_005537309.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-46 47