|
Name : RAM_42570 (RAM_42570) Accession : YP_005536438.1 Strain : Amycolatopsis mediterranei S699 Genome accession: NC_017186 Putative virulence/resistance : Resistance Product : D-lactate dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 9116579 - 9117553 bp Length : 975 bp Strand : - Note : COG1052 Lactate dehydrogenase and related dehydrogenases DNA sequence : ATGAGCGAACCGGCACTCGGGATGACGATCTACGGGTGTGCACCCGACGAAGCCGTGCTGTTCCGGGAGATGGCGCCGGG CTTCGGGGTGACACCGACCATCACCGGTGCGGCGGTGTCCGAGGCCAACGCCGCACTGGCGGCCGGTAACCGGTGCGTCA GCGTCGGGCACAAGACGCCGCTCACCCGGAGAACTCTTCTCGCGCTCAGCCGGGTCGGCGTCACCTACGTCTCCACGAGG AGCGTCGGCTACGACCACATCGACGTCGGATACGCCCGGAGCGTCGGCATTTCCGTCGGGAACGTCGCCTATTCGCCGGA CAGCGTGGCCGACTACACGCTGATGCTGATGTTGATGCTCGTGCGGGACGCCAAGTCCGTCATCCGCCGCGCGGAGGAGC ACGACTACCGGCTGAACGACGTGCGCGGGAAAGAGCTGCGCGATCTGACCGTCGGGGTGGTCGGGACCGGACGCATCGGT TCCGCCGTCGTCGGCCGGTTGCGCGGGTTCGGGGCTCGGGTGGTGGCTCACGACTGCTGTCCCCAGGCCGGCCTCGACTA CGTCGAACTCGACGAACTGCTGCGGCTGAGCGACATCGTCACGCTCCACACGCCACTCGACGCCGGAACGCACCACCTCC TGGACCGACGGCGGCTCGAGCGGATGAAGCCCGGAGCGTTCGTCGTCAACACCGGGCGAGGCCCCCTTCTCGACACCGAG GCGCTCGTCGCGGCACTGGAAAACGGCAGGCTGGGCGGCGCCGCGCTGGACGTCCTCGAAGGGGAAGAAGGCGTCTTCTA CGCCGACTGCCGCGATCGGCCCGTCGACAGCGACCTGCTGGTGCGGCTGCAGAAGCTGCCGAACGTGCTGATCAGCCCGC ACACCGCGTACTACACCGACCACGCGCTCGGCGACACCGTCGAAAACTCCATCATCAACTGCTTGAACTTCGAAAGCGGG AAGCGGCATGAATAG Protein sequence : MSEPALGMTIYGCAPDEAVLFREMAPGFGVTPTITGAAVSEANAALAAGNRCVSVGHKTPLTRRTLLALSRVGVTYVSTR SVGYDHIDVGYARSVGISVGNVAYSPDSVADYTLMLMLMLVRDAKSVIRRAEEHDYRLNDVRGKELRDLTVGVVGTGRIG SAVVGRLRGFGARVVAHDCCPQAGLDYVELDELLRLSDIVTLHTPLDAGTHHLLDRRRLERMKPGAFVVNTGRGPLLDTE ALVAALENGRLGGAALDVLEGEEGVFYADCRDRPVDSDLLVRLQKLPNVLISPHTAYYTDHALGDTVENSIINCLNFESG KRHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2295 | NP_815952.1 | D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 4e-88 | 59 |
| vanHB | YP_008394258.1 | VanH protein, D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 3e-87 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RAM_42570 | YP_005536438.1 | D-lactate dehydrogenase | AF155139.2.orf4.gene | Protein | 1e-92 | 62 |
| RAM_42570 | YP_005536438.1 | D-lactate dehydrogenase | NC_014475.1.orf2.gen | Protein | 4e-92 | 59 |
| RAM_42570 | YP_005536438.1 | D-lactate dehydrogenase | NC_005054.2598279.p0 | Protein | 4e-92 | 59 |
| RAM_42570 | YP_005536438.1 | D-lactate dehydrogenase | U35369.1.gene5.p01 | Protein | 1e-87 | 58 |
| RAM_42570 | YP_005536438.1 | D-lactate dehydrogenase | AF310956.2.orf4.gene | Protein | 7e-88 | 58 |
| RAM_42570 | YP_005536438.1 | D-lactate dehydrogenase | AF130997.1.orf3.gene | Protein | 6e-79 | 56 |
| RAM_42570 | YP_005536438.1 | D-lactate dehydrogenase | FJ349556.1.orf3.gene | Protein | 4e-88 | 56 |
