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Name : vanB (RAM_42565) Accession : YP_005536437.1 Strain : Amycolatopsis mediterranei S699 Genome accession: NC_017186 Putative virulence/resistance : Resistance Product : D-alanine--D-lactate ligase Function : - COG functional category : - COG ID : - EC number : - Position : 9115558 - 9116586 bp Length : 1029 bp Strand : - Note : COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes DNA sequence : ATGAATAGGCTCAAGGTCGGGATCATCTTCGGGGGCGCCTCCGAGGAACACCCCGTCTCGGTGAAATCCGCGCAAGAGGT CGCGCGGCACCTCGACACCGGGAAGTACGAACCGTTCTGGATCGGGATCACGAAGGACGGCGCCTGGAAACTCGGTGACG GCCCGGGCGAAAGCTGGGAAGCCGGGCGGACGGTCGTGCTGTCGCCGGACCGGAGCGTGCCGGGCTTGCTGGTCCTCGAA GACGGCAAGTACGAGACGATCGGCCTGGACGTGGTGCTGCCCGTGCTGCACGGCAAGCTCGGCGAGGACGGCGCGATGCA GGGCCTGCTGGAGCTTTCCGGGATCCCGTACGCGGGCTGCGACGTCCCGAGTTCCGCGCTGTGCATGGACAAATCCCTCG CTTACGTCGTCGCCGCGAGCGCGGGCATCGCGACGCCGAAATTCCGGACCGTCCTGGCGGGCGACGACGCCGGCGCGTTC ACCTATCCCGTCTTCGTGAAGCCGGCGCGCTCGGGTTCTTCCTTCGGCGTCAGCAAGGTTTCCGGCCGGGAAGAACTGGC CGCCGCGATCAGCACCGCGGCGCAGTACGACGCGAAGGTGCTGATCGAAGAGGCCGTCGTCGGCAGCGAGGTCGGGTGCG CCGTTCTGGGGAACGGCCGCGAGCTGTTCGCCGGAGAGGTCGACCGGATCGCCCTCTCCCACGGCTTTTTCCGGATCCAC CAGGAAGAGCAGCCCGAAAGCGGCTCCGAGAACTCGACGCCCATCGTGCCCGCCGACGTTCCGGCAGAGACCCGGGCGCG AGTCCAGCAGACGGCGAAGGCCATCTACCGCGCTCTGGGATGCAAAGGGCTGGCACGGGTCGACATGTTCCTCACCGACG ACGGCACGGTGGTCCTCAACGAGGTCAACACCCTGCCCGGCTTGACGTCGTACAGCCGCTACCCCCGGATGATGGCGGCC GCCGGCGTGCCGCTGTCCGCGCTGATCGACCGGCTCGTTTCCCTGGCCATGACCGGGGCCGCCCGGTGA Protein sequence : MNRLKVGIIFGGASEEHPVSVKSAQEVARHLDTGKYEPFWIGITKDGAWKLGDGPGESWEAGRTVVLSPDRSVPGLLVLE DGKYETIGLDVVLPVLHGKLGEDGAMQGLLELSGIPYAGCDVPSSALCMDKSLAYVVAASAGIATPKFRTVLAGDDAGAF TYPVFVKPARSGSSFGVSKVSGREELAAAISTAAQYDAKVLIEEAVVGSEVGCAVLGNGRELFAGEVDRIALSHGFFRIH QEEQPESGSENSTPIVPADVPAETRARVQQTAKAIYRALGCKGLARVDMFLTDDGTVVLNEVNTLPGLTSYSRYPRMMAA AGVPLSALIDRLVSLAMTGAAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanB | YP_008394259.1 | Vancomycin B-type resistance protein vanB, D-alanine--D-lactate ligase | Not tested | Not named | Protein | 2e-103 | 66 |
| vanB | NP_815951.1 | D-alanine--D-lactate ligase | Not tested | Not named | Protein | 1e-101 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| vanB | YP_005536437.1 | D-alanine--D-lactate ligase | AF310956.2.orf5.gene | Protein | 1e-103 | 66 |
| vanB | YP_005536437.1 | D-alanine--D-lactate ligase | AY145441.gene.p01 | Protein | 1e-103 | 66 |
| vanB | YP_005536437.1 | D-alanine--D-lactate ligase | U35369.1.gene6.p01 | Protein | 5e-102 | 65 |
| vanB | YP_005536437.1 | D-alanine--D-lactate ligase | AE016830.1.gene2250. | Protein | 5e-102 | 65 |
| vanB | YP_005536437.1 | D-alanine--D-lactate ligase | U00456.gene.p01 | Protein | 5e-102 | 65 |
| vanB | YP_005536437.1 | D-alanine--D-lactate ligase | AF277571.gene.p01 | Protein | 1e-103 | 64 |
| vanB | YP_005536437.1 | D-alanine--D-lactate ligase | NC_014475.1.orf3.gen | Protein | 2e-99 | 63 |
| vanB | YP_005536437.1 | D-alanine--D-lactate ligase | NC_005054.2598280.p0 | Protein | 2e-99 | 63 |
| vanB | YP_005536437.1 | D-alanine--D-lactate ligase | AF130997.1.orf4.gene | Protein | 2e-101 | 63 |
| vanB | YP_005536437.1 | D-alanine--D-lactate ligase | AY489045.gene.p01 | Protein | 2e-100 | 63 |
