Gene Information

Name : RAM_42075 (RAM_42075)
Accession : YP_005536339.1
Strain : Amycolatopsis mediterranei S699
Genome accession: NC_017186
Putative virulence/resistance : Unknown
Product : dipeptide/oligopeptide/nickel ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 9017992 - 9018945 bp
Length : 954 bp
Strand : -
Note : COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

DNA sequence :
ATGACTGACCCGAACCTGGTGAGTGGTGGCGGGGCCGACGCGGCGCAGCTGTCCCGCGTCGACGACTCCGCCACCGGCCC
GCAGAAACCCCGCAGCCTGTGGAGCGACGCCTGGCAGCAGCTGCGGCGCAAGCCGGCGGTCATCGCCTCGGCGGTGATCA
TCCTGTTCATCGTGCTGCTCGCGATCGCCCCCGGCCTGTTCAGCTCGCGCGACGCGGGTTTCAGCGACCTGGCCCACGCC
AACGAAGGGCCGTCCGCGGACGCCTGGTTCGGCTACGACAACCAGGGCGCCGACGTCTACGCCCGCACGATCTACGGCAC
GCGCGCCTCGGTGCTGGTCGGCGTGTTCTCCACGCTGCTGACCGTGCTCTTCGGCTCGCTCGTCGGCATCCTCGCCGGCT
ACTACGGGCGGTTCGTCGACAGCCTGCTCTCCCGGTTCGGCGACATCTTCGCCGGCCTGCCGTTCATCCTCGGCGCGATC
GTCATCCTGACGACGTTCAACGCACCCGGCTCGAACCCCGGCGGCGTCACGATCATCGTCCAGGTGGTGTGCTCGATCGC
CGTGCTGAGCTGGCCGGTGGCCATGCGGATCATGCGCTCGGCGACGCTGGTGGCCAAGCAGCTCGACTACGTCAAGGCCG
CGCGCGGCCTCGGCGCGAGCACCCCGCGGATCATCTTCCGGCACCTGCTGCCGAACACGATCGCGCCGGTGCTGGTGTAC
GCCACCATCGCGCTCGGCGCGTTCATCGGCGCCGAAGCGACGCTCGCTTTCCTCGGCATCGGCGTGCGCGCACCGGTGGT
TTCGTGGGGCGTGCTGATCTCCGACTCGAAGGACTACTTCCAGAACGACCCGCACATGCTGCTGTTCCCCGGCGCCTTCG
TCACCCTGACCGTGCTGGCCTTCGTGATGCTCGGTGACGGCATCCGCGACGCGCTCGATCCGAAGTCGAGGTAG

Protein sequence :
MTDPNLVSGGGADAAQLSRVDDSATGPQKPRSLWSDAWQQLRRKPAVIASAVIILFIVLLAIAPGLFSSRDAGFSDLAHA
NEGPSADAWFGYDNQGADVYARTIYGTRASVLVGVFSTLLTVLFGSLVGILAGYYGRFVDSLLSRFGDIFAGLPFILGAI
VILTTFNAPGSNPGGVTIIVQVVCSIAVLSWPVAMRIMRSATLVAKQLDYVKAARGLGASTPRIIFRHLLPNTIAPVLVY
ATIALGAFIGAEATLAFLGIGVRAPVVSWGVLISDSKDYFQNDPHMLLFPGAFVTLTVLAFVMLGDGIRDALDPKSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 3e-58 46